RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 LMNB1P20700 586 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 AFF1P51825 1210 aaKnown RBP10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 INSM1Q01101 510 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 MPP2Q14168 576 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 ALDH1L2Q3SY69 923 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 SEZ6Q53EL9 994 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 PARP10Q53GL7 1025 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 HSP90AB3PQ58FF7 597 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 FAM177A1Q8N128 213 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 IL22RA1Q8N6P7 574 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 JARID2Q92833 1246 aaPredicted RBP10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 ACDQ96AP0 544 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 CBX8Q9HC52 389 aa10.13□□□□□ -0.79
ECHDC1-212ENST00000461239 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 WIPF1O43516 503 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 SMARCA5O60264 1052 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 BCAR3O75815 825 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 DDX58O95786 925 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 ETFBP38117 255 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 PTPN11Q06124 597 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 SLC10A5Q5PT55 438 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 BEND3Q5T5X7 828 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 SCARA3Q6AZY7 606 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 DNAAF4Q8WXU2 420 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 UTP14AQ9BVJ6 771 aaKnown RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 NRSN2Q9GZP1 204 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 CACNA2D2Q9NY47 1150 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 COL11A2P13942 1736 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 CACNA1FO60840 1977 aa10.12□□□□□ -0.79
ECHDC1-212ENST00000461239 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 SRGNP10124 158 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 HCLS1P14317 486 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 CDC25BP30305 580 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 ST5P78524 1137 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 CRY2Q49AN0 593 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 KANK3Q6NY19 840 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 TXNDC11Q6PKC3 985 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 REC114Q7Z4M0 266 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 SLC51AQ86UW1 340 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 C2CD5Q86YS7 1000 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 NYXQ9GZU5 481 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 OSBPL2Q9H1P3 480 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 PIF1Q9H611 641 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 TRMT112Q9UI30 125 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 PPME1Q9Y570 386 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 MRVI1Q9Y6F6 885 aa10.11□□□□□ -0.79
ECHDC1-212ENST00000461239 RIC1Q4ADV7 1423 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 GSTP1P09211 210 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 PDE6BP35913 854 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 CASP7P55210 303 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 NOP9Q86U38 636 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 CKAP2LQ8IYA6 745 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 ZBTB38Q8NAP3 1195 aaPredicted RBP10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 CCDC191Q8NCU4 936 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 SHDQ96IW2 340 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 SRRTQ9BXP5 876 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 SMC4Q9NTJ3 1288 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 NOB1Q9ULX3 412 aaKnown RBP10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 PPT2Q9UMR5 302 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 TNNQ9UQP3 1299 aa10.1□□□□□ -0.79
ECHDC1-212ENST00000461239 H0YIN7 160 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 LINC01387J3KSC0 135 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 TM4SF5O14894 197 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 PCCAP05165 728 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 SELPP16109 830 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 GSTM4Q03013 218 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 SERINC3Q13530 473 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 GCKRQ14397 625 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 CCDC81Q6ZN84 652 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 C8orf86Q6ZUL3 223 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 LINS1Q8NG48 757 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 SLC7A3Q8WY07 619 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 WNT8BQ93098 351 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 YTHDC1Q96MU7 727 aaKnown RBP10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 CWC25Q9NXE8 425 aaPredicted RBP10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 COL4A1P02462 1669 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 DLEC1Q9Y238 1755 aa10.09□□□□□ -0.79
ECHDC1-212ENST00000461239 PTPRCP08575 1304 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 RNF123Q5XPI4 1314 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 SH3TC1Q8TE82 1336 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 DDX60Q8IY21 1712 aaKnown RBP10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 M0R082 166 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 NPHP1O15259 732 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 LILRB5O75023 590 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 ECEL1O95672 775 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 C19orf57Q0VDD7 668 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 MAP1SQ66K74 1059 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 CHSY3Q70JA7 882 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 ZNF417Q8TAU3 575 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 MASTLQ96GX5 879 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 ZNF587Q96SQ5 575 aaPredicted RBP10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 ZSWIM4Q9H7M6 989 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
ECHDC1-212ENST00000461239 OSGEPQ9NPF4 335 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms