RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 HOMER1Q86YM7 354 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 RAB11FIP4Q86YS3 637 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 CCDC144CPQ8IYA2 1237 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 BRF1Q92994 677 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 MAML3Q96JK9 1138 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 UNC93B1Q9H1C4 597 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 ZSWIM6Q9HCJ5 1215 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 A1CFQ9NQ94 594 aaKnown RBP21.37■■□□□ 1.01
DDR1-241ENST00000460944 FLRT1Q9NZU1 646 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 NAP1L2Q9ULW6 460 aaPredicted RBP21.37■■□□□ 1.01
DDR1-241ENST00000460944 POTEB2H3BUK9 544 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 ZBTB5O15062 677 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 TRIM32Q13049 653 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 TRAF1Q13077 416 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 AMNQ9BXJ7 453 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 RIOX1Q9H6W3 641 aa21.36■■□□□ 1.01
DDR1-241ENST00000460944 HMX1Q9NP08 348 aaPredicted RBP21.36■■□□□ 1.01
DDR1-241ENST00000460944 RBM28Q9NW13 759 aaKnown RBP21.36■■□□□ 1.01
DDR1-241ENST00000460944 RPTORQ8N122 1335 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 DNAJC25-GNG10A0A024R161 153 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 SMARCA1P28370 1054 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 RCAN1P53805 252 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 FBXL16Q8N461 479 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 MTMR8Q96EF0 704 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 PIGSQ96S52 555 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 SPZ1Q9BXG8 430 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.35■■□□□ 1.019e-6■■■■■ 32.4
DDR1-241ENST00000460944 BRPF3Q9ULD4 1205 aa21.35■■□□□ 1.01
DDR1-241ENST00000460944 GOLGA8AA7E2F4 631 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 GOLGA8BA8MQT2 603 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 NFIBO00712 420 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 SEC24BO95487 1268 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 CYP2C19P33261 490 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 CACNB2Q08289 660 aaPredicted RBP21.34■■□□□ 1.01
DDR1-241ENST00000460944 RTN1Q16799 776 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 MAP3K21Q5TCX8 1036 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 RRP36Q96EU6 259 aaKnown RBP21.34■■□□□ 1.01
DDR1-241ENST00000460944 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
DDR1-241ENST00000460944 CYP39A1Q9NYL5 469 aa21.34■■□□□ 1.01
DDR1-241ENST00000460944 SEC63Q9UGP8 760 aaKnown RBP21.34■■□□□ 1.01
DDR1-241ENST00000460944 MRPL11Q9Y3B7 192 aaKnown RBP21.34■■□□□ 1.01
DDR1-241ENST00000460944 PNMA6FA0A0J9YX94 578 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 PTPDC1A2A3K4 754 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 CYTH3O43739 400 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 PLEKHA8P1O95397 391 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 GJB1P08034 283 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 APOBRQ0VD83 1088 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 RNF207Q6ZRF8 634 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 TMTC3Q6ZXV5 915 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 ZNF467Q7Z7K2 595 aaPredicted RBP21.33■■□□□ 1.01
DDR1-241ENST00000460944 MSL3Q8N5Y2 521 aaKnown RBP21.33■■□□□ 1.01
DDR1-241ENST00000460944 CLEC4DQ8WXI8 215 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 AGXT2Q9BYV1 514 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 MCM3APO60318 1980 aa21.33■■□□□ 1.01
DDR1-241ENST00000460944 METAP2P50579 478 aaKnown RBP eCLIP21.32■■□□□ 13e-6■■■■□ 25.7
DDR1-241ENST00000460944 PPP2R5BQ15173 497 aa21.32■■□□□ 1
DDR1-241ENST00000460944 SLC35G1Q2M3R5 365 aa21.32■■□□□ 1
DDR1-241ENST00000460944 MCF2L2Q86YR7 1114 aa21.32■■□□□ 1
DDR1-241ENST00000460944 SRBD1Q8N5C6 995 aaKnown RBP21.32■■□□□ 1
DDR1-241ENST00000460944 FAM133AQ8N9E0 248 aa21.32■■□□□ 1
DDR1-241ENST00000460944 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
DDR1-241ENST00000460944 TINF2Q9BSI4 451 aa21.32■■□□□ 1
DDR1-241ENST00000460944 PAK6Q9NQU5 681 aaPredicted RBP21.32■■□□□ 1
DDR1-241ENST00000460944 PDRG1Q9NUG6 133 aa21.32■■□□□ 1
DDR1-241ENST00000460944 PCDHA1Q9Y5I3 950 aa21.32■■□□□ 1
DDR1-241ENST00000460944 CCDC196A0A1B0GTZ2 297 aa21.31■■□□□ 1
DDR1-241ENST00000460944 POTEFA5A3E0 1075 aa21.31■■□□□ 1
DDR1-241ENST00000460944 CNTN2Q02246 1040 aa21.31■■□□□ 1
DDR1-241ENST00000460944 BAATQ14032 418 aaPredicted RBP21.31■■□□□ 1
DDR1-241ENST00000460944 MAF1Q9H063 256 aa21.31■■□□□ 1
DDR1-241ENST00000460944 CNPY2Q9Y2B0 182 aa21.31■■□□□ 1
DDR1-241ENST00000460944 SYNGAP1Q96PV0 1343 aa21.3■■□□□ 1
DDR1-241ENST00000460944 LCTP09848 1927 aa21.3■■□□□ 1
DDR1-241ENST00000460944 IGHA2P01877 340 aa21.3■■□□□ 1
DDR1-241ENST00000460944 CALML3P27482 149 aa21.3■■□□□ 1
DDR1-241ENST00000460944 CNGA1P29973 690 aa21.3■■□□□ 1
DDR1-241ENST00000460944 SLC30A10Q6XR72 485 aa21.3■■□□□ 1
DDR1-241ENST00000460944 CMTR1Q8N1G2 835 aaKnown RBP21.3■■□□□ 1
DDR1-241ENST00000460944 RGS22Q8NE09 1264 aa21.3■■□□□ 1
DDR1-241ENST00000460944 DEFB118Q96PH6 123 aa21.3■■□□□ 1
DDR1-241ENST00000460944 ADD3Q9UEY8 706 aaKnown RBP21.3■■□□□ 1
DDR1-241ENST00000460944 NRBP1Q9UHY1 535 aa21.3■■□□□ 1
DDR1-241ENST00000460944 ASB14A6NK59 587 aa21.29■■□□□ 1
DDR1-241ENST00000460944 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
DDR1-241ENST00000460944 CYBAP13498 195 aa21.29■■□□□ 1
DDR1-241ENST00000460944 CAPN2P17655 700 aa21.29■■□□□ 1
DDR1-241ENST00000460944 CCND3P30281 292 aaPredicted RBP21.29■■□□□ 1
DDR1-241ENST00000460944 GJA8P48165 433 aa21.29■■□□□ 1
DDR1-241ENST00000460944 RPS6P62753 249 aaKnown RBP21.29■■□□□ 1
DDR1-241ENST00000460944 TOB2Q14106 344 aaPredicted RBP21.29■■□□□ 1
DDR1-241ENST00000460944 MAMDC4Q6UXC1 1216 aa21.29■■□□□ 1
DDR1-241ENST00000460944 CCDC82Q8N4S0 544 aa21.29■■□□□ 1
DDR1-241ENST00000460944 U2AF1L4Q8WU68 220 aaKnown RBP21.29■■□□□ 1
DDR1-241ENST00000460944 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
DDR1-241ENST00000460944 MSCO60682 206 aa21.28■■□□□ 1
DDR1-241ENST00000460944 SGPL1O95470 568 aa21.28■■□□□ 1
DDR1-241ENST00000460944 ARMCX2Q7L311 632 aa21.28■■□□□ 1
DDR1-241ENST00000460944 IL17RAQ96F46 866 aa21.28■■□□□ 1
DDR1-241ENST00000460944 FGD4Q96M96 766 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms