RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 CLEC4DQ8WXI8 215 aa23.98■■□□□ 1.43
RPUSD3-210ENST00000460909 UNC93B1Q9H1C4 597 aa23.98■■□□□ 1.43
RPUSD3-210ENST00000460909 DHX16O60231 1041 aaKnown RBP23.97■■□□□ 1.43
RPUSD3-210ENST00000460909 SMARCA1P28370 1054 aa23.97■■□□□ 1.43
RPUSD3-210ENST00000460909 CACNB2Q08289 660 aaPredicted RBP23.97■■□□□ 1.43
RPUSD3-210ENST00000460909 CCDC144CPQ8IYA2 1237 aa23.97■■□□□ 1.43
RPUSD3-210ENST00000460909 DDX11Q96FC9 970 aa23.97■■□□□ 1.43
RPUSD3-210ENST00000460909 FGD4Q96M96 766 aa23.97■■□□□ 1.43
RPUSD3-210ENST00000460909 LCTP09848 1927 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 POTEFA5A3E0 1075 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 NFIBO00712 420 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 ZBTB5O15062 677 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 PPP1R11O60927 126 aaPredicted RBP23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 PLEKHA8P1O95397 391 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 PRKAR2AP13861 404 aaKnown RBP23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 CYP2C19P33261 490 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 SOX10P56693 466 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 FAM133AQ8N9E0 248 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 BRF1Q92994 677 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 PIGSQ96S52 555 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 CYP46A1Q9Y6A2 500 aa23.96■■□□□ 1.43
RPUSD3-210ENST00000460909 PFASO15067 1338 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 RPTORQ8N122 1335 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 KLF18A0A0U1RQI7 1052 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 GNAQP50148 359 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 APOBRQ0VD83 1088 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 USH1GQ495M9 461 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 SYNE3Q6ZMZ3 975 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 FBXO11Q86XK2 927 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 SRBD1Q8N5C6 995 aaKnown RBP23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 LZTS2Q9BRK4 669 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 UPF3BQ9BZI7 483 aaKnown RBP23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 RNF208Q9H0X6 261 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 PAK6Q9NQU5 681 aaPredicted RBP23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 CYP39A1Q9NYL5 469 aa23.95■■□□□ 1.42
RPUSD3-210ENST00000460909 ZBTB43O43298 467 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 RCAN1P53805 252 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 EVCP57679 992 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 FGD1P98174 961 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 CNTN2Q02246 1040 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 TOB2Q14106 344 aaPredicted RBP23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 MFSD14CQ5VZR4 134 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 CMTR1Q8N1G2 835 aaKnown RBP23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 TMEM106CQ9BVX2 250 aa23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 FAM217BQ9NTX9 383 aaPredicted RBP23.94■■□□□ 1.42
RPUSD3-210ENST00000460909 ABCB11O95342 1321 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 GJB1P08034 283 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 MAMDC4Q6UXC1 1216 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 TMTC3Q6ZXV5 915 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 ZNF467Q7Z7K2 595 aaPredicted RBP23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 HOMER1Q86YM7 354 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 TINF2Q9BSI4 451 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 AMNQ9BXJ7 453 aa23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 HMX1Q9NP08 348 aaPredicted RBP23.93■■□□□ 1.42
RPUSD3-210ENST00000460909 ASTN1O14525 1302 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 PNMA6FA0A0J9YX94 578 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 SOWAHBA6NEL2 793 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 POTEB2H3BUK9 544 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 CYBAP13498 195 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 BAATQ14032 418 aaPredicted RBP23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 NSMFQ6X4W1 530 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 RGS22Q8NE09 1264 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 TRPV1Q8NER1 839 aa23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.92■■□□□ 1.42
RPUSD3-210ENST00000460909 NID2Q14112 1375 aa23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 MKI67P46013 3256 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 OPLAHO14841 1288 aa23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 CDC27P30260 824 aa23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 CCND3P30281 292 aaPredicted RBP23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 FUT2Q10981 343 aa23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 RTN1Q16799 776 aa23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 MSL3Q8N5Y2 521 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 PURBQ96QR8 312 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 MAF1Q9H063 256 aa23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
RPUSD3-210ENST00000460909 GOLGA8AA7E2F4 631 aa23.9■■□□□ 1.42
RPUSD3-210ENST00000460909 GOLGA8BA8MQT2 603 aa23.9■■□□□ 1.42
RPUSD3-210ENST00000460909 TBC1D5Q92609 795 aa23.9■■□□□ 1.42
RPUSD3-210ENST00000460909 MRPL11Q9Y3B7 192 aaKnown RBP23.9■■□□□ 1.42
RPUSD3-210ENST00000460909 MCM3APO60318 1980 aa23.9■■□□□ 1.42
RPUSD3-210ENST00000460909 SYNGAP1Q96PV0 1343 aa23.89■■□□□ 1.42
RPUSD3-210ENST00000460909 SNAI1O95863 264 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 EN2P19622 333 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 GJA8P48165 433 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 RGS19P49795 217 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 RPS6P62753 249 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 PRAMEF19Q5SWL8 479 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 SLC30A10Q6XR72 485 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 RNF207Q6ZRF8 634 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 PIBF1Q8WXW3 757 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 SHISA4Q96DD7 197 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 RRP36Q96EU6 259 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 DEFB118Q96PH6 123 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 ALDH8A1Q9H2A2 487 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 PDRG1Q9NUG6 133 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 PCDHA1Q9Y5I3 950 aa23.89■■□□□ 1.41
RPUSD3-210ENST00000460909 CNTNAP5Q8WYK1 1306 aa23.88■■□□□ 1.41
RPUSD3-210ENST00000460909 PTPDC1A2A3K4 754 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms