RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
HLA-DQB1-207ENST00000460185 CHMP4CQ96CF2 233 aa12.1□□□□□ -0.47
HLA-DQB1-207ENST00000460185 MMP19Q99542 508 aa12.1□□□□□ -0.47
HLA-DQB1-207ENST00000460185 PRR12Q9ULL5 1215 aa12.1□□□□□ -0.47
HLA-DQB1-207ENST00000460185 FRMPD2Q68DX3 1309 aaPredicted RBP12.1□□□□□ -0.47
HLA-DQB1-207ENST00000460185 MCM3APO60318 1980 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 EPB41L2O43491 1005 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 DHX16O60231 1041 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 MYCP01106 439 aaPredicted RBP12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 HOXC6P09630 235 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 CCL5P13501 91 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 TMEM67Q5HYA8 995 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 MFSD14CQ5VZR4 134 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 TRIB2Q92519 343 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 USP6NLQ92738 828 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 RNF208Q9H0X6 261 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
HLA-DQB1-207ENST00000460185 PRC1O43663 620 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ICAM1P05362 532 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 STOX1Q6ZVD7 989 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DDX11Q96FC9 970 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 PFASO15067 1338 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CCDC69A6NI79 296 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 GJB1P08034 283 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ALAS1P13196 640 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SEC23AQ15436 765 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 OLFML2BQ68BL8 750 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CCDC174Q6PII3 467 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 RNF146Q9NTX7 359 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 LCTP09848 1927 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SMCHD1A6NHR9 2005 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 BRCA2P51587 3418 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DDAH1O94760 285 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CALM1P0DP23 149 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CALM2P0DP24 149 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CALM3P0DP25 149 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 KIF5BP33176 963 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SLC16A2P36021 539 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 FGD1P98174 961 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TRAF1Q13077 416 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MTFR1Q15390 333 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TRERF1Q96PN7 1200 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 DIS3Q9Y2L1 958 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MSCO60682 206 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 GJA8P48165 433 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 RGS19P49795 217 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ANTXR2P58335 489 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CCL14Q16627 93 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MAP3K21Q5TCX8 1036 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 TTBK2Q6IQ55 1244 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MSL3Q8N5Y2 521 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 PAK6Q9NQU5 681 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 RIPK3Q9Y572 518 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 ZNF536O15090 1300 aa12.05□□□□□ -0.48
HLA-DQB1-207ENST00000460185 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 PGK2P07205 417 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 PSMA5P28066 241 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 HSPA4P34932 840 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 LIFRP42702 1097 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 PSEN2P49810 448 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 GNAQP50148 359 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 GRM4Q14833 912 aa12.04□□□□□ -0.48
HLA-DQB1-207ENST00000460185 CDC37Q16543 378 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms