RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 RAET1EQ8TD07 263 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 TRIB2Q92519 343 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 NUDT12Q9BQG2 462 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 A1CFQ9NQ94 594 aaKnown RBP14.89□□□□□ -0.03
COL18A1-206ENST00000459895 TPCN1Q9ULQ1 816 aa14.89□□□□□ -0.03
COL18A1-206ENST00000459895 hCG_1642624A0A1W2PR95 340 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 FCER1AP12319 257 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 CYP2B6P20813 491 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 PDIA3P30101 505 aaKnown RBP14.88□□□□□ -0.03
COL18A1-206ENST00000459895 GNAQP50148 359 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 STK3Q13188 491 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 KCTD2Q14681 263 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
COL18A1-206ENST00000459895 CCL14Q16627 93 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 TKFCQ3LXA3 575 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 FBXO11Q86XK2 927 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 ABRAQ8N0Z2 381 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 CCDC82Q8N4S0 544 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 CHST13Q8NET6 341 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 SH3TC2Q8TF17 1288 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 CLEC4DQ8WXI8 215 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 LZTS2Q9BRK4 669 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 ALDH8A1Q9H2A2 487 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-206ENST00000459895 FBXO40Q9UH90 709 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 ABCB11O95342 1321 aa14.88□□□□□ -0.03
COL18A1-206ENST00000459895 OPLAHO14841 1288 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 ADCY3O60266 1144 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 COBLO75128 1261 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 CCT2P78371 535 aaKnown RBP14.87□□□□□ -0.03
COL18A1-206ENST00000459895 SLC9C1Q4G0N8 1177 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 TNS4Q8IZW8 715 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 SLAIN1Q8ND83 568 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 RRP36Q96EU6 259 aaKnown RBP14.87□□□□□ -0.03
COL18A1-206ENST00000459895 FGD4Q96M96 766 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 AMNQ9BXJ7 453 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 FLRT1Q9NZU1 646 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 ASTN1O14525 1302 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 PFASO15067 1338 aa14.87□□□□□ -0.03
COL18A1-206ENST00000459895 DNAJC25-GNG10A0A024R161 153 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 PPFIA3O75145 1194 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 HOXC6P09630 235 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 GRK4P32298 578 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
COL18A1-206ENST00000459895 ST3GAL1Q11201 340 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 TRIM32Q13049 653 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 RABEP1Q15276 862 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 NSMFQ6X4W1 530 aa14.86□□□□□ -0.03
COL18A1-206ENST00000459895 GPKOWQ92917 476 aaPredicted RBP eCLIP14.86□□□□□ -0.03
COL18A1-206ENST00000459895 SEC63Q9UGP8 760 aaKnown RBP14.86□□□□□ -0.03
COL18A1-206ENST00000459895 PNMA6FA0A0J9YX94 578 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 STRNO43815 780 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 HMGCRP04035 888 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 INHAP05111 366 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 SCRN1Q12765 414 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 ANKRD1Q15327 319 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 NTRK3Q16288 839 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 ZNF792Q3KQV3 632 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 ANKRD35Q8N283 1001 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 PHKBQ93100 1093 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 ZNF274Q96GC6 653 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-206ENST00000459895 MAML3Q96JK9 1138 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 CYP39A1Q9NYL5 469 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 PNMA2Q9UL42 364 aa14.85□□□□□ -0.03
COL18A1-206ENST00000459895 PTPDC1A2A3K4 754 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 CD2BP2O95400 341 aaKnown RBP14.84□□□□□ -0.03
COL18A1-206ENST00000459895 XRCC5P13010 732 aaKnown RBP14.84□□□□□ -0.03
COL18A1-206ENST00000459895 CNTN2Q02246 1040 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 ME3Q16798 604 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 WWC2Q6AWC2 1192 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 HEATR3Q7Z4Q2 680 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 PXYLP1Q8TE99 480 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 ARMC5Q96C12 935 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 ABHD8Q96I13 439 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 ZNF333Q96JL9 665 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 PURBQ96QR8 312 aaKnown RBP14.84□□□□□ -0.03
COL18A1-206ENST00000459895 PCDHA1Q9Y5I3 950 aa14.84□□□□□ -0.03
COL18A1-206ENST00000459895 DDX49Q9Y6V7 483 aaKnown RBP14.84□□□□□ -0.03
COL18A1-206ENST00000459895 CCDC196A0A1B0GTZ2 297 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 PFKFB2O60825 505 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 DTNBO60941 627 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 IGHA2P01877 340 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 TYW1BQ6NUM6 668 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 NECAB1Q8N987 351 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 FAM133AQ8N9E0 248 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 DDX11Q96FC9 970 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 COL20A1Q9P218 1284 aa14.83□□□□□ -0.04
COL18A1-206ENST00000459895 MRPL11Q9Y3B7 192 aaKnown RBP14.83□□□□□ -0.04
COL18A1-206ENST00000459895 KIAA1217Q5T5P2 1943 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 SOWAHBA6NEL2 793 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 MYCP01106 439 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-206ENST00000459895 PRKAR2AP13861 404 aaKnown RBP14.82□□□□□ -0.04
COL18A1-206ENST00000459895 IFNAR1P17181 557 aa14.82□□□□□ -0.04
COL18A1-206ENST00000459895 CALML3P27482 149 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms