RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 HMX1Q9NP08 348 aaPredicted RBP25.3■■□□□ 1.64
SSNA1-202ENST00000459860 NR2E3Q9Y5X4 410 aa25.3■■□□□ 1.64
SSNA1-202ENST00000459860 PFASO15067 1338 aa25.3■■□□□ 1.64
SSNA1-202ENST00000459860 PRKAR2AP13861 404 aaKnown RBP25.29■■□□□ 1.64
SSNA1-202ENST00000459860 EXOSC10Q01780 885 aaKnown RBP25.29■■□□□ 1.64
SSNA1-202ENST00000459860 COL9A3Q14050 684 aaPredicted RBP25.29■■□□□ 1.64
SSNA1-202ENST00000459860 SGMS1Q86VZ5 419 aa25.29■■□□□ 1.64
SSNA1-202ENST00000459860 MAML3Q96JK9 1138 aa25.29■■□□□ 1.64
SSNA1-202ENST00000459860 TCEANC2Q96MN5 208 aa25.29■■□□□ 1.64
SSNA1-202ENST00000459860 MYL10Q9BUA6 226 aa25.29■■□□□ 1.64
SSNA1-202ENST00000459860 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.29■■□□□ 1.64
SSNA1-202ENST00000459860 DIS3Q9Y2L1 958 aaKnown RBP25.29■■□□□ 1.64
SSNA1-202ENST00000459860 CASTP20810 708 aaKnown RBP25.28■■□□□ 1.64
SSNA1-202ENST00000459860 TRIM32Q13049 653 aa25.28■■□□□ 1.64
SSNA1-202ENST00000459860 FLRT1Q9NZU1 646 aa25.28■■□□□ 1.64
SSNA1-202ENST00000459860 RPTORQ8N122 1335 aa25.28■■□□□ 1.64
SSNA1-202ENST00000459860 TRIOBPQ9H2D6 2365 aa25.27■■□□□ 1.64
SSNA1-202ENST00000459860 GNAQP50148 359 aa25.27■■□□□ 1.64
SSNA1-202ENST00000459860 ZNF792Q3KQV3 632 aa25.27■■□□□ 1.64
SSNA1-202ENST00000459860 USH1GQ495M9 461 aa25.27■■□□□ 1.64
SSNA1-202ENST00000459860 DIS3LQ8TF46 1054 aaKnown RBP25.27■■□□□ 1.64
SSNA1-202ENST00000459860 PAWRQ96IZ0 340 aaKnown RBP25.27■■□□□ 1.64
SSNA1-202ENST00000459860 JMJD4Q9H9V9 463 aa25.27■■□□□ 1.64
SSNA1-202ENST00000459860 A1CFQ9NQ94 594 aaKnown RBP25.27■■□□□ 1.64
SSNA1-202ENST00000459860 SMCHD1A6NHR9 2005 aa25.27■■□□□ 1.64
SSNA1-202ENST00000459860 POTEB2H3BUK9 544 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 RPS6KB1P23443 525 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 CACNB2Q08289 660 aaPredicted RBP25.26■■□□□ 1.63
SSNA1-202ENST00000459860 TRAF1Q13077 416 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 QRICH1Q2TAL8 776 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 MAP3K21Q5TCX8 1036 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 NSMFQ6X4W1 530 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 MICU3Q86XE3 530 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 FBXO11Q86XK2 927 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 LZTS2Q9BRK4 669 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 ABCB11O95342 1321 aa25.26■■□□□ 1.63
SSNA1-202ENST00000459860 CPA1P15085 419 aa25.25■■□□□ 1.63
SSNA1-202ENST00000459860 CYP2C19P33261 490 aa25.25■■□□□ 1.63
SSNA1-202ENST00000459860 MNX1P50219 401 aaPredicted RBP25.25■■□□□ 1.63
SSNA1-202ENST00000459860 MUM1L1Q5H9M0 696 aa25.25■■□□□ 1.63
SSNA1-202ENST00000459860 HOMER1Q86YM7 354 aa25.25■■□□□ 1.63
SSNA1-202ENST00000459860 AMNQ9BXJ7 453 aa25.25■■□□□ 1.63
SSNA1-202ENST00000459860 DNAJC25-GNG10A0A024R161 153 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 ZBTB5O15062 677 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 ZBTB43O43298 467 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 EVI5O60447 810 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 TAL1P17542 331 aaPredicted RBP25.24■■□□□ 1.63
SSNA1-202ENST00000459860 RXRAP19793 462 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 APOA5Q6Q788 366 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 Q6ZUG5 572 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 CCDC144CPQ8IYA2 1237 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 MSL3Q8N5Y2 521 aaKnown RBP25.24■■□□□ 1.63
SSNA1-202ENST00000459860 RIOX1Q9H6W3 641 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 NAP1L2Q9ULW6 460 aaPredicted RBP25.24■■□□□ 1.63
SSNA1-202ENST00000459860 CYP46A1Q9Y6A2 500 aa25.24■■□□□ 1.63
SSNA1-202ENST00000459860 KLF18A0A0U1RQI7 1052 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 RUFY3Q7L099 469 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 ZNF467Q7Z7K2 595 aaPredicted RBP25.23■■□□□ 1.63
SSNA1-202ENST00000459860 RAB11FIP4Q86YS3 637 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 ANKLE1Q8NAG6 615 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 TINF2Q9BSI4 451 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 SPZ1Q9BXG8 430 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 TM6SF1Q9BZW5 370 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 CYP39A1Q9NYL5 469 aa25.23■■□□□ 1.63
SSNA1-202ENST00000459860 PTPDC1A2A3K4 754 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 NFIBO00712 420 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 SMARCA1P28370 1054 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 CNGA1P29973 690 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 ANAPC15P60006 121 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 NECAB2Q7Z6G3 386 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 FANCBQ8NB91 859 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 MTMR8Q96EF0 704 aa25.22■■□□□ 1.63
SSNA1-202ENST00000459860 RBM28Q9NW13 759 aaKnown RBP25.22■■□□□ 1.63
SSNA1-202ENST00000459860 SEC63Q9UGP8 760 aaKnown RBP25.22■■□□□ 1.63
SSNA1-202ENST00000459860 MRPL11Q9Y3B7 192 aaKnown RBP25.22■■□□□ 1.63
SSNA1-202ENST00000459860 FRMPD3Q5JV73 1810 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 SYNGAP1Q96PV0 1343 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 RNF207Q6ZRF8 634 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 BRF1Q92994 677 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 RRP36Q96EU6 259 aaKnown RBP25.21■■□□□ 1.63
SSNA1-202ENST00000459860 PIGSQ96S52 555 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 ZSWIM6Q9HCJ5 1215 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 NRBP1Q9UHY1 535 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 CNPY2Q9Y2B0 182 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 GTF3C3Q9Y5Q9 886 aa25.21■■□□□ 1.63
SSNA1-202ENST00000459860 BAZ2BQ9UIF8 2168 aaKnown RBP25.21■■□□□ 1.63
SSNA1-202ENST00000459860 LCTP09848 1927 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 GOLGA8AA7E2F4 631 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 GOLGA8BA8MQT2 603 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 CCND3P30281 292 aaPredicted RBP25.2■■□□□ 1.62
SSNA1-202ENST00000459860 RCAN1P53805 252 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 CNTN2Q02246 1040 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 RTN1Q16799 776 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 MCF2L2Q86YR7 1114 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 FAM133AQ8N9E0 248 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 CLEC4DQ8WXI8 215 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 MAF1Q9H063 256 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 OGDHLQ9ULD0 1010 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 BRPF3Q9ULD4 1205 aa25.2■■□□□ 1.62
SSNA1-202ENST00000459860 MCM3APO60318 1980 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms