RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 DUSP11O75319 330 aaKnown RBP18.83■□□□□ 0.6
COL7A1-203ENST00000459756 SART3Q15020 963 aaKnown RBP18.83■□□□□ 0.6
COL7A1-203ENST00000459756 CLEC4DQ8WXI8 215 aa18.83■□□□□ 0.6
COL7A1-203ENST00000459756 LSG1Q9H089 658 aaKnown RBP18.83■□□□□ 0.6
COL7A1-203ENST00000459756 CPVLQ9H3G5 476 aa18.83■□□□□ 0.6
COL7A1-203ENST00000459756 TAF6LQ9Y6J9 622 aa18.83■□□□□ 0.6
COL7A1-203ENST00000459756 IFIT3O14879 490 aaKnown RBP18.82■□□□□ 0.6
COL7A1-203ENST00000459756 PGK1P00558 417 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 ADCYAP1R1P41586 468 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 BAATQ14032 418 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-203ENST00000459756 CCDC144BQ3MJ40 725 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 STOX1Q6ZVD7 989 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 ADGRF4Q8IZF3 695 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 LENG1Q96BZ8 264 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-203ENST00000459756 KATNBL1Q9H079 304 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 PRO3102Q9H379 93 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 ADD3Q9UEY8 706 aaKnown RBP18.82■□□□□ 0.6
COL7A1-203ENST00000459756 ZMYND8Q9ULU4 1186 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-203ENST00000459756 PHF24Q9UPV7 400 aa18.82■□□□□ 0.6
COL7A1-203ENST00000459756 ASTN1O14525 1302 aa18.81■□□□□ 0.6
COL7A1-203ENST00000459756 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
COL7A1-203ENST00000459756 LOC102724159A0A0B4J2E5 919 aa18.81■□□□□ 0.6
COL7A1-203ENST00000459756 PTPDC1A2A3K4 754 aa18.81■□□□□ 0.6
COL7A1-203ENST00000459756 ADAMTS4O75173 837 aa18.81■□□□□ 0.6
COL7A1-203ENST00000459756 ATN1P54259 1190 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-203ENST00000459756 PWP2Q15269 919 aaKnown RBP18.81■□□□□ 0.6
COL7A1-203ENST00000459756 CDC37Q16543 378 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-203ENST00000459756 TSEN34Q9BSV6 310 aaKnown RBP18.81■□□□□ 0.6
COL7A1-203ENST00000459756 MAF1Q9H063 256 aa18.81■□□□□ 0.6
COL7A1-203ENST00000459756 RBM27Q9P2N5 1060 aaKnown RBP18.81■□□□□ 0.6
COL7A1-203ENST00000459756 LCTP09848 1927 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 DHX16O60231 1041 aaKnown RBP18.8■□□□□ 0.6
COL7A1-203ENST00000459756 WTAPQ15007 396 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 USH1GQ495M9 461 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 SLC39A5Q6ZMH5 540 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 RNF207Q6ZRF8 634 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 MB21D2Q8IYB1 491 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-203ENST00000459756 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 SPC25Q9HBM1 224 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 ANO2Q9NQ90 1003 aa18.8■□□□□ 0.6
COL7A1-203ENST00000459756 TRIOBPQ9H2D6 2365 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 ABCB11O95342 1321 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 KLRF2D3W0D1 207 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 SLC34A2O95436 690 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 SYN1P17600 705 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 CALML3P27482 149 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 RTP1P59025 263 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 SNX17Q15036 470 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 TMEM67Q5HYA8 995 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 C1orf53Q5VUE5 145 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 SLC30A10Q6XR72 485 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 STAG2Q8N3U4 1231 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 MORC4Q8TE76 937 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 FERMT2Q96AC1 680 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 PURBQ96QR8 312 aaKnown RBP18.79■□□□□ 0.6
COL7A1-203ENST00000459756 JMJD4Q9H9V9 463 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 LRRC37A2A6NM11 1700 aa18.79■□□□□ 0.6
COL7A1-203ENST00000459756 A0A1W2PPC1 479 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 PALM3A6NDB9 673 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-203ENST00000459756 SLC27A2O14975 620 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 ADCY6O43306 1168 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 CDC45O75419 566 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 CST5P28325 142 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-203ENST00000459756 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
COL7A1-203ENST00000459756 ANTXR2P58335 489 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 RPS6P62753 249 aaKnown RBP18.78■□□□□ 0.6
COL7A1-203ENST00000459756 GRM4Q14833 912 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 QRICH1Q2TAL8 776 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 CHST3Q7LGC8 479 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 FBXO11Q86XK2 927 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 IGDCC4Q8TDY8 1250 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
COL7A1-203ENST00000459756 GDF15Q99988 308 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 MTA3Q9BTC8 594 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 UPF3AQ9H1J1 476 aaKnown RBP18.78■□□□□ 0.6
COL7A1-203ENST00000459756 VAT1LQ9HCJ6 419 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 VTA1Q9NP79 307 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 MAD2L2Q9UI95 211 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 MYH6P13533 1939 aa18.78■□□□□ 0.6
COL7A1-203ENST00000459756 A0A1W2PQ45 241 aaPredicted RBP18.77■□□□□ 0.6
COL7A1-203ENST00000459756 A0A1W2PQY0 241 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 MOXD2PA6NHM9 499 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 BMP8BP34820 402 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 ACLYP53396 1101 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 GJA9P57773 515 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 TNFAIP2Q03169 654 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 NECTIN1Q15223 517 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 CREB3L3Q68CJ9 461 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
COL7A1-203ENST00000459756 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 MCF2L2Q86YR7 1114 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 PCSK9Q8NBP7 692 aaKnown RBP18.77■□□□□ 0.6
COL7A1-203ENST00000459756 DNERQ8NFT8 737 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 SENP2Q9HC62 589 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 ATP11BQ9Y2G3 1177 aa18.77■□□□□ 0.6
COL7A1-203ENST00000459756 MRPL11Q9Y3B7 192 aaKnown RBP18.77■□□□□ 0.6
COL7A1-203ENST00000459756 B4DLN1 442 aa18.76■□□□□ 0.59
COL7A1-203ENST00000459756 C6orf222P0C671 652 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms