RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 HOMER1Q86YM7 354 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 ARMC5Q96C12 935 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 RRP36Q96EU6 259 aaKnown RBP29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 PIGSQ96S52 555 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 ABCB11O95342 1321 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 COBLO75128 1261 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 ELNP15502 786 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 USH1GQ495M9 461 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 MUM1L1Q5H9M0 696 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 SH3TC2Q8TF17 1288 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 ZNF274Q96GC6 653 aaPredicted RBP29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 BACH2Q9BYV9 841 aa29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 BIN2Q9UBW5 565 aaPredicted RBP29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 DIS3Q9Y2L1 958 aaKnown RBP29.96■■■□□ 2.39
SEMA3C-205ENST00000458729 NPLOC4Q8TAT6 608 aa29.95■■■□□ 2.38
SEMA3C-205ENST00000458729 MAF1Q9H063 256 aa29.95■■■□□ 2.38
SEMA3C-205ENST00000458729 PFASO15067 1338 aa29.95■■■□□ 2.38
SEMA3C-205ENST00000458729 NID2Q14112 1375 aa29.95■■■□□ 2.38
SEMA3C-205ENST00000458729 HMGCRP04035 888 aa29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 PGK2P07205 417 aa29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 PDIA3P30101 505 aaKnown RBP29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 NEK4P51957 841 aa29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 UBXN2AP68543 259 aa29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 A1CFQ9NQ94 594 aaKnown RBP29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 FAM217BQ9NTX9 383 aaPredicted RBP29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 SEC63Q9UGP8 760 aaKnown RBP29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 MRPL11Q9Y3B7 192 aaKnown RBP29.94■■■□□ 2.38
SEMA3C-205ENST00000458729 ZNFX1Q9P2E3 1918 aaKnown RBP29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 DNAJC25-GNG10A0A024R161 153 aa29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 TAL1P17542 331 aaPredicted RBP29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 ZNF792Q3KQV3 632 aa29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 CMTR1Q8N1G2 835 aaKnown RBP29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 CLEC4DQ8WXI8 215 aa29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 TRIB2Q92519 343 aa29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 PCDHA1Q9Y5I3 950 aa29.93■■■□□ 2.38
SEMA3C-205ENST00000458729 BAZ2BQ9UIF8 2168 aaKnown RBP29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 CDC27P30260 824 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 CCL14Q16627 93 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 OLFML2BQ68BL8 750 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 NSMFQ6X4W1 530 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 CCDC82Q8N4S0 544 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 RGS22Q8NE09 1264 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 ZNF333Q96JL9 665 aa29.92■■■□□ 2.38
SEMA3C-205ENST00000458729 SMCHD1A6NHR9 2005 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 MYH6P13533 1939 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 NFIBO00712 420 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 PPP1R11O60927 126 aaPredicted RBP29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 ADD1P35611 737 aaKnown RBP29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 MCF2L2Q86YR7 1114 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 PIBF1Q8WXW3 757 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 MAML3Q96JK9 1138 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 CYP39A1Q9NYL5 469 aa29.91■■■□□ 2.38
SEMA3C-205ENST00000458729 POTEB2H3BUK9 544 aa29.9■■■□□ 2.38
SEMA3C-205ENST00000458729 INHAP05111 366 aa29.9■■■□□ 2.38
SEMA3C-205ENST00000458729 AK2P54819 239 aa29.9■■■□□ 2.38
SEMA3C-205ENST00000458729 MFSD14CQ5VZR4 134 aa29.9■■■□□ 2.38
SEMA3C-205ENST00000458729 KIF2CQ99661 725 aa29.9■■■□□ 2.38
SEMA3C-205ENST00000458729 FUT2Q10981 343 aa29.89■■■□□ 2.38
SEMA3C-205ENST00000458729 LARP6Q9BRS8 491 aaKnown RBP29.89■■■□□ 2.38
SEMA3C-205ENST00000458729 FLRT1Q9NZU1 646 aa29.89■■■□□ 2.38
SEMA3C-205ENST00000458729 CNTNAP5Q8WYK1 1306 aa29.88■■■□□ 2.37
SEMA3C-205ENST00000458729 RNF207Q6ZRF8 634 aa29.88■■■□□ 2.37
SEMA3C-205ENST00000458729 ZNF467Q7Z7K2 595 aaPredicted RBP29.88■■■□□ 2.37
SEMA3C-205ENST00000458729 MSL3Q8N5Y2 521 aaKnown RBP29.88■■■□□ 2.37
SEMA3C-205ENST00000458729 FAM133AQ8N9E0 248 aa29.88■■■□□ 2.37
SEMA3C-205ENST00000458729 IL27Q8NEV9 243 aa29.88■■■□□ 2.37
SEMA3C-205ENST00000458729 PTPDC1A2A3K4 754 aa29.87■■■□□ 2.37
SEMA3C-205ENST00000458729 IGHA2P01877 340 aa29.87■■■□□ 2.37
SEMA3C-205ENST00000458729 CCT2P78371 535 aaKnown RBP29.87■■■□□ 2.37
SEMA3C-205ENST00000458729 BAATQ14032 418 aaPredicted RBP29.87■■■□□ 2.37
SEMA3C-205ENST00000458729 SAMD3Q8N6K7 520 aa29.87■■■□□ 2.37
SEMA3C-205ENST00000458729 TBC1D32Q96NH3 1257 aa29.87■■■□□ 2.37
SEMA3C-205ENST00000458729 TPCN1Q9ULQ1 816 aa29.86■■■□□ 2.37
SEMA3C-205ENST00000458729 V9GY48 417 aaPredicted RBP29.86■■■□□ 2.37
SEMA3C-205ENST00000458729 RPS6P62753 249 aaKnown RBP29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 CNTN2Q02246 1040 aa29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 RABEP1Q15276 862 aa29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 TINF2Q9BSI4 451 aa29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 SLKQ9H2G2 1235 aaPredicted RBP29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 MAP3K20Q9NYL2 800 aaKnown RBP29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 RBM27Q9P2N5 1060 aaKnown RBP29.85■■■□□ 2.37
SEMA3C-205ENST00000458729 CCDC85CA6NKD9 419 aa29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 TRIM32Q13049 653 aa29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 STK3Q13188 491 aa29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 MAP3K21Q5TCX8 1036 aa29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 MAMDC4Q6UXC1 1216 aa29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 NCOA5Q9HCD5 579 aaKnown RBP29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 ADD3Q9UEY8 706 aaKnown RBP29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 PLXNA1Q9UIW2 1896 aa29.84■■■□□ 2.37
SEMA3C-205ENST00000458729 RPTORQ8N122 1335 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 hCG_1642624A0A1W2PR95 340 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 CPLX1O14810 134 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 PRKAR2AP13861 404 aaKnown RBP29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 IFNAR1P17181 557 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 CALML3P27482 149 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 CACNB2Q08289 660 aaPredicted RBP29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 NTRK3Q16288 839 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 CPLX2Q6PUV4 134 aaKnown RBP29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 SLC30A10Q6XR72 485 aa29.83■■■□□ 2.37
SEMA3C-205ENST00000458729 TMEM106CQ9BVX2 250 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms