RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 LGALS16A8MUM7 142 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 UFL1O94874 794 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 TUBBP07437 444 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 IL1R1P14778 569 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 HMGB2P26583 209 aaKnown RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 PRCPP42785 496 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 CDK8P49336 464 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 DNM2P50570 870 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 UBXN1Q04323 297 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 NFIXQ14938 502 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 ZNF771Q7L3S4 317 aaPredicted RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 TMC4Q7Z404 712 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 NEK8Q86SG6 692 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 LRRN4CLQ8ND94 238 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 RASGRP4Q8TDF6 673 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 FAM163AQ96GL9 167 aaPredicted RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 MTRQ99707 1265 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 NAPGQ99747 312 aaPredicted RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 CD209Q9NNX6 404 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 EXOC1Q9NV70 894 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 KBTBD4Q9NVX7 518 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 SAP30BPQ9UHR5 308 aaKnown RBP12.28□□□□□ -0.44
RFX3-211ENST00000458034 CDC23Q9UJX2 597 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 PLIN4Q96Q06 1357 aa12.28□□□□□ -0.44
RFX3-211ENST00000458034 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 FGFR1OPO95684 399 aaKnown RBP12.27□□□□□ -0.45
RFX3-211ENST00000458034 PNMA6AP0CW24 399 aaPredicted RBP12.27□□□□□ -0.45
RFX3-211ENST00000458034 KRT9P35527 623 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 FXR1P51114 621 aaKnown RBP eCLIP12.27□□□□□ -0.45
RFX3-211ENST00000458034 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 GPSM2P81274 684 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 MTF1Q14872 753 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 BRD3Q15059 726 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 WHAMMP3Q1A5X7 153 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 TMEM266Q2M3C6 531 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 SLC4A8Q2Y0W8 1093 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 ASPRV1Q53RT3 343 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 COBLL1Q53SF7 1204 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 ZNF569Q5MCW4 686 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 CNNM4Q6P4Q7 775 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 MB21D1Q8N884 522 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 RETREG2Q8NC44 543 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 GIMAP8Q8ND71 665 aaPredicted RBP12.27□□□□□ -0.45
RFX3-211ENST00000458034 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 C7orf25Q9BPX7 421 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 RAB34Q9BZG1 259 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 TMEM60Q9H2L4 133 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 LZTFL1Q9NQ48 299 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 ZNF446Q9NWS9 450 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 QSER1Q2KHR3 1735 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
RFX3-211ENST00000458034 CYTH3O43739 400 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 KLRC4O43908 158 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 ERLIN1O75477 346 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 BBOX1O75936 387 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
RFX3-211ENST00000458034 VEGFAP15692 232 aaPredicted RBP12.26□□□□□ -0.45
RFX3-211ENST00000458034 CCNE1P24864 410 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 CHMP4BP1P59074 171 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 KRT83P78385 493 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 NAALADL2Q58DX5 795 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 EHBP1Q8NDI1 1231 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 PKNOX2Q96KN3 472 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 GBP3Q9H0R5 595 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
RFX3-211ENST00000458034 STK17AQ9UEE5 414 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 PRDM4Q9UKN5 801 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 LUC7L2Q9Y383 392 aaKnown RBP12.26□□□□□ -0.45
RFX3-211ENST00000458034 GAKO14976 1311 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 FLT1P17948 1338 aa12.26□□□□□ -0.45
RFX3-211ENST00000458034 FANCGO15287 622 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 CCNT1O60563 726 aaKnown RBP12.25□□□□□ -0.45
RFX3-211ENST00000458034 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
RFX3-211ENST00000458034 PLCG1P19174 1290 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
RFX3-211ENST00000458034 NOVP48745 357 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 PDE4DQ08499 809 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 PRR5LQ6MZQ0 368 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 REXO1Q8N1G1 1221 aaKnown RBP12.25□□□□□ -0.45
RFX3-211ENST00000458034 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 P2RX5Q93086 422 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 PODXL2Q9NZ53 605 aa12.25□□□□□ -0.45
RFX3-211ENST00000458034 USP21Q9UK80 565 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms