RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 FDX1P10109 184 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 PTPREP23469 700 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 FLT3LGP49771 235 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 PKN1Q16512 942 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 MORN1Q5T089 497 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 CCDC83Q8IWF9 413 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 GTF3C6Q969F1 213 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 AIFM3Q96NN9 605 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
TIMP1-205ENST00000456754 PRDM10Q9NQV6 1147 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 PTCH2Q9Y6C5 1203 aa16.29■□□□□ 0.2
TIMP1-205ENST00000456754 SLC25A27O95847 323 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 CYP2B6P20813 491 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 SMARCA1P28370 1054 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 ADORA2AP29274 412 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 GRB14Q14449 540 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 CCL14Q16627 93 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 SLC30A10Q6XR72 485 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 USP6NLQ92738 828 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 MMP19Q99542 508 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 AMNQ9BXJ7 453 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 MROH8Q9H579 483 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 ACAD9Q9H845 621 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
TIMP1-205ENST00000456754 SRRDQ9UH36 339 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 ZNF236Q9UL36 1845 aa16.28■□□□□ 0.2
TIMP1-205ENST00000456754 ST18O60284 1047 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 ELNP15502 786 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 IFNAR1P17181 557 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 CNTN2Q02246 1040 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
TIMP1-205ENST00000456754 NSMFQ6X4W1 530 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 HEATR3Q7Z4Q2 680 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 CTU1Q7Z7A3 348 aaKnown RBP16.27■□□□□ 0.2
TIMP1-205ENST00000456754 CHST13Q8NET6 341 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 FGD4Q96M96 766 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 FLRT1Q9NZU1 646 aa16.27■□□□□ 0.2
TIMP1-205ENST00000456754 MCM3APO60318 1980 aa16.27■□□□□ 0.19
TIMP1-205ENST00000456754 ASTN1O14525 1302 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 SLC15A5A6NIM6 579 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 CPLX1O14810 134 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 FCER1AP12319 257 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 TRIM32Q13049 653 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 NSUN7Q8NE18 718 aaKnown RBP16.26■□□□□ 0.19
TIMP1-205ENST00000456754 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 TMX3Q96JJ7 454 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
TIMP1-205ENST00000456754 PTPN22Q9Y2R2 807 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 IVNS1ABPQ9Y6Y0 642 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 HTTP42858 3142 aa16.26■□□□□ 0.19
TIMP1-205ENST00000456754 ABCB11O95342 1321 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 STXBP3O00186 592 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
TIMP1-205ENST00000456754 FDPSP14324 419 aaKnown RBP16.25■□□□□ 0.19
TIMP1-205ENST00000456754 CALML3P27482 149 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 HOXA13P31271 388 aaPredicted RBP16.25■□□□□ 0.19
TIMP1-205ENST00000456754 FOSBP53539 338 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 BAATQ14032 418 aaPredicted RBP16.25■□□□□ 0.19
TIMP1-205ENST00000456754 KCTD2Q14681 263 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 TKFCQ3LXA3 575 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 CYP39A1Q9NYL5 469 aa16.25■□□□□ 0.19
TIMP1-205ENST00000456754 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 SOWAHBA6NEL2 793 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 COPB2P35606 906 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
TIMP1-205ENST00000456754 PPP2R5BQ15173 497 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
TIMP1-205ENST00000456754 ZNF792Q3KQV3 632 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 SH3TC2Q8TF17 1288 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 TRIB2Q92519 343 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 MCOLN1Q9GZU1 580 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
TIMP1-205ENST00000456754 CFBP00751 764 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 SCG2P13521 617 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
TIMP1-205ENST00000456754 UBE2SQ16763 222 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.23■□□□□ 0.19
TIMP1-205ENST00000456754 DPP9Q86TI2 863 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 RAET1EQ8TD07 263 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 ZSCAN31Q96LW9 406 aaPredicted RBP16.23■□□□□ 0.19
TIMP1-205ENST00000456754 RNF26Q9BY78 433 aaPredicted RBP16.23■□□□□ 0.19
TIMP1-205ENST00000456754 FBXO40Q9UH90 709 aa16.23■□□□□ 0.19
TIMP1-205ENST00000456754 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
TIMP1-205ENST00000456754 STRNO43815 780 aa16.22■□□□□ 0.19
TIMP1-205ENST00000456754 ADCY3O60266 1144 aa16.22■□□□□ 0.19
TIMP1-205ENST00000456754 MYCP01106 439 aaPredicted RBP16.22■□□□□ 0.19
TIMP1-205ENST00000456754 HOXD10P28358 340 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms