RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 RNF207Q6ZRF8 634 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 UBE2Q1Q7Z7E8 422 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 FBXO11Q86XK2 927 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 FAM133AQ8N9E0 248 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 CTCFLQ8NI51 663 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 DIS3LQ8TF46 1054 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 JMJD4Q9H9V9 463 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 ADD3Q9UEY8 706 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 MAD2L2Q9UI95 211 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 FAM184BQ9ULE4 1060 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 NFIBO00712 420 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 SNAI1O95863 264 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 AKR1A1P14550 325 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 CALML3P27482 149 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 QRICH1Q2TAL8 776 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 SYNE3Q6ZMZ3 975 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 ARMCX2Q7L311 632 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 ABHD16BQ9H3Z7 469 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 LY9Q9HBG7 655 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 ABCB11O95342 1321 aa21.03■□□□□ 0.96
PDLIM2-215ENST00000456545 SOWAHBA6NEL2 793 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 KBTBD13C9JR72 458 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 KIF5BP33176 963 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 ACVR2BQ13705 512 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 ZNF654Q8IZM8 581 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 MPHOSPH6Q99547 160 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 LRRC2Q9BYS8 371 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 GPHNQ9NQX3 736 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 MRPL11Q9Y3B7 192 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 NR2E3Q9Y5X4 410 aa21.02■□□□□ 0.96
PDLIM2-215ENST00000456545 SMCHD1A6NHR9 2005 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 SH2B2O14492 632 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 EVI5O60447 810 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 DDAH1O94760 285 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 ZNF865P0CJ78 1059 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 CALM1P0DP23 149 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 CALM2P0DP24 149 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 CALM3P0DP25 149 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 LIFRP42702 1097 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 FGD1P98174 961 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 TROAPQ12815 778 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 TRAF1Q13077 416 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 GJC2Q5T442 439 aaPredicted RBP21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 PRPF38BQ5VTL8 546 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 HOMER1Q86YM7 354 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 MCF2L2Q86YR7 1114 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 CLEC4DQ8WXI8 215 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 AMNQ9BXJ7 453 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 SLC12A7Q9Y666 1083 aa21.01■□□□□ 0.95
PDLIM2-215ENST00000456545 B4DLN1 442 aa21■□□□□ 0.95
PDLIM2-215ENST00000456545 HMGB1P09429 215 aaKnown RBP21■□□□□ 0.95
PDLIM2-215ENST00000456545 MRPL12P52815 198 aaKnown RBP21■□□□□ 0.95
PDLIM2-215ENST00000456545 TSGA10IPQ3SY00 556 aa21■□□□□ 0.95
PDLIM2-215ENST00000456545 NOL8Q76FK4 1167 aaKnown RBP21■□□□□ 0.95
PDLIM2-215ENST00000456545 DHX32Q7L7V1 743 aaKnown RBP21■□□□□ 0.95
PDLIM2-215ENST00000456545 RASEFQ8IZ41 740 aa21■□□□□ 0.95
PDLIM2-215ENST00000456545 MYL10Q9BUA6 226 aa21■□□□□ 0.95
PDLIM2-215ENST00000456545 SENP6Q9GZR1 1112 aaPredicted RBP21■□□□□ 0.95
PDLIM2-215ENST00000456545 XPNPEP3Q9NQH7 507 aa21■□□□□ 0.95
PDLIM2-215ENST00000456545 MYH6P13533 1939 aa21■□□□□ 0.95
PDLIM2-215ENST00000456545 DNM1LO00429 736 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 ZBTB5O15062 677 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 GNAQP50148 359 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 RPS6P62753 249 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 RNF180Q86T96 592 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 RGS22Q8NE09 1264 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 PIBF1Q8WXW3 757 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 FGD4Q96M96 766 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 PURBQ96QR8 312 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 MAP3K14Q99558 947 aa20.99■□□□□ 0.95
PDLIM2-215ENST00000456545 TNRC18O15417 2968 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 MNX1P50219 401 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 ADCK5Q3MIX3 580 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 CCDC144BQ3MJ40 725 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 SLC30A10Q6XR72 485 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 EEPD1Q7L9B9 569 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 PIGSQ96S52 555 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 LZTS2Q9BRK4 669 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 RIOX1Q9H6W3 641 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 SPC25Q9HBM1 224 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 PCDHA1Q9Y5I3 950 aa20.98■□□□□ 0.95
PDLIM2-215ENST00000456545 PGK1P00558 417 aa20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 HSPA4P34932 840 aa20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 ALDH5A1P51649 535 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 PDE4DQ08499 809 aa20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 JAKMIP1Q96N16 626 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 MAF1Q9H063 256 aa20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 NAP1L2Q9ULW6 460 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-215ENST00000456545 MCM3APO60318 1980 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 PNMA6FA0A0J9YX94 578 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 CFBP00751 764 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 RXRAP19793 462 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 PSMA5P28066 241 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 LRRC41Q15345 812 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 RAB11FIP4Q86YS3 637 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 DNERQ8NFT8 737 aa20.96■□□□□ 0.95
PDLIM2-215ENST00000456545 RRP36Q96EU6 259 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms