RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 PTPN22Q9Y2R2 807 aa21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 CTDP1Q9Y5B0 961 aaPredicted RBP21.62■■□□□ 1.05
SBDSP1-205ENST00000456312 ALAS1P13196 640 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 IFNAR1P17181 557 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 FLT3LGP49771 235 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 GHRHRQ02643 423 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 ARHGEF6Q15052 776 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 FBXO11Q86XK2 927 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 HOMER1Q86YM7 354 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 AMNQ9BXJ7 453 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 ACAD9Q9H845 621 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 A1CFQ9NQ94 594 aaKnown RBP21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 FBXO40Q9UH90 709 aa21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 NAP1L2Q9ULW6 460 aaPredicted RBP21.61■■□□□ 1.05
SBDSP1-205ENST00000456312 ABCB11O95342 1321 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 FRMPD3Q5JV73 1810 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 NFIBO00712 420 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 DHX16O60231 1041 aaKnown RBP21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 COBLO75128 1261 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 ADORA2AP29274 412 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 MAP2K5Q13163 448 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 CCDC82Q8N4S0 544 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 GTF3C6Q969F1 213 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 FGD4Q96M96 766 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 NUDT12Q9BQG2 462 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 HOMER2Q9NSB8 354 aa21.6■■□□□ 1.05
SBDSP1-205ENST00000456312 CTDNEP1O95476 244 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 FCER1AP12319 257 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 HOXD10P28358 340 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 STK3Q13188 491 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 PKN1Q16512 942 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 PKN2Q16513 984 aaKnown RBP21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 USH1GQ495M9 461 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 COL13A1Q5TAT6 717 aaPredicted RBP21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 RRP36Q96EU6 259 aaKnown RBP21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 MMP19Q99542 508 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 RNF26Q9BY78 433 aaPredicted RBP21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 LIMCH1Q9UPQ0 1083 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 PTCH2Q9Y6C5 1203 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 KIAA1217Q5T5P2 1943 aa21.59■■□□□ 1.05
SBDSP1-205ENST00000456312 hCG_1642624A0A1W2PR95 340 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 PRPF3O43395 683 aaKnown RBP21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 XRCC5P13010 732 aaKnown RBP21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 ZNF792Q3KQV3 632 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 WDR78Q5VTH9 848 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 FBXO46Q6PJ61 603 aaPredicted RBP21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 NOL8Q76FK4 1167 aaKnown RBP21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 RGS22Q8NE09 1264 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 NPLOC4Q8TAT6 608 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 MAF1Q9H063 256 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 SLKQ9H2G2 1235 aaPredicted RBP21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 IVNS1ABPQ9Y6Y0 642 aa21.58■■□□□ 1.05
SBDSP1-205ENST00000456312 ASTN1O14525 1302 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 BRCA2P51587 3418 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 TYW1BQ6NUM6 668 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 CCAR1Q8IX12 1150 aaKnown RBP21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 FAM133AQ8N9E0 248 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 PHKBQ93100 1093 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 SHISA4Q96DD7 197 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 APBA2Q99767 749 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 CYP39A1Q9NYL5 469 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 PCDHA1Q9Y5I3 950 aa21.57■■□□□ 1.04
SBDSP1-205ENST00000456312 RGS2P41220 211 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 SLC4A3P48751 1232 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 KCTD2Q14681 263 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 WWC2Q6AWC2 1192 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 NECAB1Q8N987 351 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 PXYLP1Q8TE99 480 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 PIBF1Q8WXW3 757 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 TBC1D5Q92609 795 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 MCOLN1Q9GZU1 580 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 FLRT1Q9NZU1 646 aa21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 V9GY48 417 aaPredicted RBP21.56■■□□□ 1.04
SBDSP1-205ENST00000456312 PFASO15067 1338 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 MYH7BA7E2Y1 1941 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 ST18O60284 1047 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 PGK2P07205 417 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 PFKFB3Q16875 520 aaPredicted RBP21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 SLC30A10Q6XR72 485 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 TRIB2Q92519 343 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 SEC63Q9UGP8 760 aaKnown RBP21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 DIS3Q9Y2L1 958 aaKnown RBP21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 MRPL11Q9Y3B7 192 aaKnown RBP21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 STK36Q9NRP7 1315 aa21.55■■□□□ 1.04
SBDSP1-205ENST00000456312 CYP2B6P20813 491 aa21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 HSD17B4P51659 736 aa21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 RPS6P62753 249 aaKnown RBP21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 CCL14Q16627 93 aa21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 NSUN7Q8NE18 718 aaKnown RBP21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 GPKOWQ92917 476 aaPredicted RBP eCLIP21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 ZSCAN31Q96LW9 406 aaPredicted RBP21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 COL20A1Q9P218 1284 aa21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 RBM27Q9P2N5 1060 aaKnown RBP21.54■■□□□ 1.04
SBDSP1-205ENST00000456312 hCG_1984214I3L0E3 225 aa21.53■■□□□ 1.04
SBDSP1-205ENST00000456312 STXBP3O00186 592 aa21.53■■□□□ 1.04
SBDSP1-205ENST00000456312 PPFIA3O75145 1194 aa21.53■■□□□ 1.04
SBDSP1-205ENST00000456312 SCG2P13521 617 aa21.53■■□□□ 1.04
SBDSP1-205ENST00000456312 FDPSP14324 419 aaKnown RBP21.53■■□□□ 1.04
SBDSP1-205ENST00000456312 CNTN2Q02246 1040 aa21.53■■□□□ 1.04
SBDSP1-205ENST00000456312 TRAF1Q13077 416 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms