RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 MYL10Q9BUA6 226 aa29.02■■■□□ 2.24
MSH2-203ENST00000454849 JMJD4Q9H9V9 463 aa29.02■■■□□ 2.24
MSH2-203ENST00000454849 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.02■■■□□ 2.24
MSH2-203ENST00000454849 ASTN1O14525 1302 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 PFASO15067 1338 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 MSCO60682 206 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 QRICH1Q2TAL8 776 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 MAMDC4Q6UXC1 1216 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 RASEFQ8IZ41 740 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 LY9Q9HBG7 655 aa29.01■■■□□ 2.23
MSH2-203ENST00000454849 SYNGAP1Q96PV0 1343 aa29■■■□□ 2.23
MSH2-203ENST00000454849 CAPN2P17655 700 aa29■■■□□ 2.23
MSH2-203ENST00000454849 CALML3P27482 149 aa29■■■□□ 2.23
MSH2-203ENST00000454849 MCM5P33992 734 aa29■■■□□ 2.23
MSH2-203ENST00000454849 SLC30A10Q6XR72 485 aa29■■■□□ 2.23
MSH2-203ENST00000454849 ZNF467Q7Z7K2 595 aaPredicted RBP29■■■□□ 2.23
MSH2-203ENST00000454849 NUP133Q8WUM0 1156 aa29■■■□□ 2.23
MSH2-203ENST00000454849 PALM3A6NDB9 673 aaPredicted RBP28.99■■■□□ 2.23
MSH2-203ENST00000454849 PGK1P00558 417 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 ACVR2BQ13705 512 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 GRM4Q14833 912 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 SLC35G1Q2M3R5 365 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 CATIPQ7Z7H3 387 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 RAB11FIP4Q86YS3 637 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 MSL3Q8N5Y2 521 aaKnown RBP28.99■■■□□ 2.23
MSH2-203ENST00000454849 PCDH10Q9P2E7 1040 aa28.99■■■□□ 2.23
MSH2-203ENST00000454849 CEP290O15078 2479 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 ERICH6BQ5W0A0 696 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 NFXL1Q6ZNB6 911 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 EEPD1Q7L9B9 569 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 PIBF1Q8WXW3 757 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 TBC1D5Q92609 795 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 TCEANC2Q96MN5 208 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 SENP6Q9GZR1 1112 aaPredicted RBP28.98■■■□□ 2.23
MSH2-203ENST00000454849 NRBP1Q9UHY1 535 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 MCM3APO60318 1980 aa28.98■■■□□ 2.23
MSH2-203ENST00000454849 WDR19Q8NEZ3 1342 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 EVI5O60447 810 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 RARBP10826 455 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 TROAPQ12815 778 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 ADCK5Q3MIX3 580 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 RNF20Q5VTR2 975 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 XPNPEP3Q9NQH7 507 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 FRMPD3Q5JV73 1810 aa28.97■■■□□ 2.23
MSH2-203ENST00000454849 SH2B2O14492 632 aaPredicted RBP28.96■■■□□ 2.23
MSH2-203ENST00000454849 COL6A1P12109 1028 aa28.96■■■□□ 2.23
MSH2-203ENST00000454849 RNF207Q6ZRF8 634 aa28.96■■■□□ 2.23
MSH2-203ENST00000454849 FBXO11Q86XK2 927 aa28.96■■■□□ 2.23
MSH2-203ENST00000454849 HOMER1Q86YM7 354 aa28.96■■■□□ 2.23
MSH2-203ENST00000454849 ZNF654Q8IZM8 581 aa28.96■■■□□ 2.23
MSH2-203ENST00000454849 FAM184BQ9ULE4 1060 aa28.96■■■□□ 2.23
MSH2-203ENST00000454849 AKR1A1P14550 325 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 RXRAP19793 462 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 ATN1P54259 1190 aaPredicted RBP28.95■■■□□ 2.22
MSH2-203ENST00000454849 IRX5P78411 483 aaPredicted RBP28.95■■■□□ 2.22
MSH2-203ENST00000454849 LRRC41Q15345 812 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 CCDC144BQ3MJ40 725 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 C7orf61Q8IZ16 206 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 ARRDC4Q8NCT1 418 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 FERMT2Q96AC1 680 aa28.95■■■□□ 2.22
MSH2-203ENST00000454849 ASB14A6NK59 587 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 ADCY6O43306 1168 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 PPP1R11O60927 126 aaPredicted RBP28.94■■■□□ 2.22
MSH2-203ENST00000454849 PTGS1P23219 599 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 RPS6P62753 249 aaKnown RBP28.94■■■□□ 2.22
MSH2-203ENST00000454849 NEK1Q96PY6 1258 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 PIGSQ96S52 555 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 KATNBL1Q9H079 304 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 ABHD16BQ9H3Z7 469 aa28.94■■■□□ 2.22
MSH2-203ENST00000454849 BAZ2BQ9UIF8 2168 aaKnown RBP28.94■■■□□ 2.22
MSH2-203ENST00000454849 CCDC69A6NI79 296 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 DNM1LO00429 736 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 CPA1P15085 419 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 LRRC26Q2I0M4 334 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 FBXO16Q8IX29 292 aaPredicted RBP28.93■■■□□ 2.22
MSH2-203ENST00000454849 TMEM87BQ96K49 555 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 PDGFCQ9NRA1 345 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 PNMA2Q9UL42 364 aa28.93■■■□□ 2.22
MSH2-203ENST00000454849 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.92■■■□□ 2.22
MSH2-203ENST00000454849 KBTBD13C9JR72 458 aa28.92■■■□□ 2.22
MSH2-203ENST00000454849 CYTH3O43739 400 aa28.92■■■□□ 2.22
MSH2-203ENST00000454849 ADCYAP1R1P41586 468 aa28.92■■■□□ 2.22
MSH2-203ENST00000454849 NR2E3Q9Y5X4 410 aa28.92■■■□□ 2.22
MSH2-203ENST00000454849 ABCB11O95342 1321 aa28.92■■■□□ 2.22
MSH2-203ENST00000454849 ALDH5A1P51649 535 aaPredicted RBP28.91■■■□□ 2.22
MSH2-203ENST00000454849 TMEM63BQ5T3F8 832 aa28.91■■■□□ 2.22
MSH2-203ENST00000454849 NOL8Q76FK4 1167 aaKnown RBP28.91■■■□□ 2.22
MSH2-203ENST00000454849 CMTR1Q8N1G2 835 aaKnown RBP28.91■■■□□ 2.22
MSH2-203ENST00000454849 MTMR8Q96EF0 704 aa28.91■■■□□ 2.22
MSH2-203ENST00000454849 ZMYND8Q9ULU4 1186 aaPredicted RBP28.91■■■□□ 2.22
MSH2-203ENST00000454849 LCTP09848 1927 aa28.9■■■□□ 2.22
MSH2-203ENST00000454849 ALPK3Q96L96 1907 aa28.9■■■□□ 2.22
MSH2-203ENST00000454849 MYADML2A6NDP7 307 aa28.9■■■□□ 2.22
MSH2-203ENST00000454849 AMNQ9BXJ7 453 aa28.9■■■□□ 2.22
MSH2-203ENST00000454849 RIOX1Q9H6W3 641 aa28.9■■■□□ 2.22
MSH2-203ENST00000454849 ZBTB5O15062 677 aa28.89■■■□□ 2.22
MSH2-203ENST00000454849 SYN1P17600 705 aa28.89■■■□□ 2.22
MSH2-203ENST00000454849 CTCFLQ8NI51 663 aaPredicted RBP28.89■■■□□ 2.22
MSH2-203ENST00000454849 ADD3Q9UEY8 706 aaKnown RBP28.89■■■□□ 2.22
MSH2-203ENST00000454849 MRPL11Q9Y3B7 192 aaKnown RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms