RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 CCL14Q16627 93 aa18.22■□□□□ 0.51
VCX3B-204ENST00000453306 ASPRV1Q53RT3 343 aa18.22■□□□□ 0.51
VCX3B-204ENST00000453306 SAMD1Q6SPF0 538 aaPredicted RBP18.22■□□□□ 0.51
VCX3B-204ENST00000453306 KIFC2Q96AC6 838 aa18.22■□□□□ 0.51
VCX3B-204ENST00000453306 SLF1Q9BQI6 1058 aa18.22■□□□□ 0.51
VCX3B-204ENST00000453306 HOXC10Q9NYD6 342 aa18.22■□□□□ 0.51
VCX3B-204ENST00000453306 NID2Q14112 1375 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 SZT2Q5T011 3432 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 GOLGA8AA7E2F4 631 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 VWA5AO00534 786 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 MSCO60682 206 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 PFKFB2O60825 505 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 CCND3P30281 292 aaPredicted RBP18.21■□□□□ 0.51
VCX3B-204ENST00000453306 SCRN1Q12765 414 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
VCX3B-204ENST00000453306 SYDE2Q5VT97 1194 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 LHX8Q68G74 356 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 GPR153Q6NV75 609 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 TMTC3Q6ZXV5 915 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 ADGRF4Q8IZF3 695 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 PRPF38AQ8NAV1 312 aaKnown RBP18.21■□□□□ 0.51
VCX3B-204ENST00000453306 SLC17A8Q8NDX2 589 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 MTMR8Q96EF0 704 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 JMJD4Q9H9V9 463 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 NAP1L2Q9ULW6 460 aaPredicted RBP18.21■□□□□ 0.51
VCX3B-204ENST00000453306 ZNF536O15090 1300 aa18.21■□□□□ 0.51
VCX3B-204ENST00000453306 CTDNEP1O95476 244 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 COL6A1P12109 1028 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 SYN1P17600 705 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 STAT2P52630 851 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 RCAN1P53805 252 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 RTN1Q16799 776 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 CCDC82Q8N4S0 544 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 VAT1LQ9HCJ6 419 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
VCX3B-204ENST00000453306 LIMCH1Q9UPQ0 1083 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 PFASO15067 1338 aa18.2■□□□□ 0.5
VCX3B-204ENST00000453306 RLFQ13129 1914 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 MYH4Q9Y623 1939 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 DLL1O00548 723 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 STRNO43815 780 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
VCX3B-204ENST00000453306 HOXC6P09630 235 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 CALM1P0DP23 149 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 CALM2P0DP24 149 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 CALM3P0DP25 149 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 MAGEA10P43363 369 aaPredicted RBP18.19■□□□□ 0.5
VCX3B-204ENST00000453306 METAP2P50579 478 aaKnown RBP eCLIP18.19■□□□□ 0.5
VCX3B-204ENST00000453306 GRB14Q14449 540 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 ANKRD1Q15327 319 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 SYNE3Q6ZMZ3 975 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 FAM160B2Q86V87 743 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 SLC38A10Q9HBR0 1119 aa18.19■□□□□ 0.5
VCX3B-204ENST00000453306 ALPK3Q96L96 1907 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 SOX1O00570 391 aaPredicted RBP18.18■□□□□ 0.5
VCX3B-204ENST00000453306 CNGA1P29973 690 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 TDHQ8IZJ6 230 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 MB21D1Q8N884 522 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 CTCFLQ8NI51 663 aaPredicted RBP18.18■□□□□ 0.5
VCX3B-204ENST00000453306 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 UBE2OQ9C0C9 1292 aaKnown RBP18.18■□□□□ 0.5
VCX3B-204ENST00000453306 RANBP17Q9H2T7 1088 aaKnown RBP18.18■□□□□ 0.5
VCX3B-204ENST00000453306 SLC5A4Q9NY91 659 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 ZNF214Q9UL59 606 aaPredicted RBP18.18■□□□□ 0.5
VCX3B-204ENST00000453306 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
VCX3B-204ENST00000453306 LRIT3Q3SXY7 679 aa18.17■□□□□ 0.5
VCX3B-204ENST00000453306 PIBF1Q8WXW3 757 aa18.17■□□□□ 0.5
VCX3B-204ENST00000453306 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
VCX3B-204ENST00000453306 AGBL1Q96MI9 1066 aa18.17■□□□□ 0.5
VCX3B-204ENST00000453306 PIGSQ96S52 555 aa18.17■□□□□ 0.5
VCX3B-204ENST00000453306 SPZ1Q9BXG8 430 aa18.17■□□□□ 0.5
VCX3B-204ENST00000453306 RAVER2Q9HCJ3 691 aaKnown RBP18.17■□□□□ 0.5
VCX3B-204ENST00000453306 DDX20Q9UHI6 824 aaKnown RBP18.17■□□□□ 0.5
VCX3B-204ENST00000453306 SMARCA1P28370 1054 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 KIF5BP33176 963 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 IKQ13123 557 aaPredicted RBP18.16■□□□□ 0.5
VCX3B-204ENST00000453306 CCDC174Q6PII3 467 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 PHKBQ93100 1093 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
VCX3B-204ENST00000453306 FLRT1Q9NZU1 646 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 CNTNAP5Q8WYK1 1306 aa18.16■□□□□ 0.5
VCX3B-204ENST00000453306 ST18O60284 1047 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 GNAQP50148 359 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 LRRC26Q2I0M4 334 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 QRICH1Q2TAL8 776 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 OLFML2BQ68BL8 750 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 CPXCR1Q8N123 301 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 NPLOC4Q8TAT6 608 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 MOV10L1Q9BXT6 1211 aaKnown RBP18.15■□□□□ 0.5
VCX3B-204ENST00000453306 SENP6Q9GZR1 1112 aaPredicted RBP18.15■□□□□ 0.5
VCX3B-204ENST00000453306 SPATC1LQ9H0A9 340 aa18.15■□□□□ 0.5
VCX3B-204ENST00000453306 MROH8Q9H579 483 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms