RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 BMP2KLQ5H9B9 411 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 MUM1L1Q5H9M0 696 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 FAM133AQ8N9E0 248 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 GLT1D1Q96MS3 346 aa25.35■■□□□ 1.65
C9orf3-208ENST00000451893 ADAMTS4O75173 837 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 ACLYP53396 1101 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 TLE2Q04725 743 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 SNX17Q15036 470 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 KCNA10Q16322 511 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 RUFY2Q8WXA3 655 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 MPHOSPH6Q99547 160 aaKnown RBP25.34■■□□□ 1.65
C9orf3-208ENST00000451893 KRT23Q9C075 422 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 CYP39A1Q9NYL5 469 aa25.34■■□□□ 1.65
C9orf3-208ENST00000451893 ADD3Q9UEY8 706 aaKnown RBP25.34■■□□□ 1.65
C9orf3-208ENST00000451893 B4E1Z4 1266 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 DHX16O60231 1041 aaKnown RBP25.33■■□□□ 1.65
C9orf3-208ENST00000451893 CLTBP09497 229 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 TNFAIP2Q03169 654 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 LRIT3Q3SXY7 679 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 GNASQ5JWF2 1037 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 GPATCH4Q5T3I0 446 aaKnown RBP25.33■■□□□ 1.65
C9orf3-208ENST00000451893 TTC22Q5TAA0 569 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 C1orf53Q5VUE5 145 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 BTNL9Q6UXG8 535 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 UBAC1Q9BSL1 405 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 CNNM2Q9H8M5 875 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 PDLIM7Q9NR12 457 aa25.33■■□□□ 1.65
C9orf3-208ENST00000451893 DCDC2CA8MYV0 355 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 ZNF543Q08ER8 600 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 EEPD1Q7L9B9 569 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 DGKHQ86XP1 1220 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 FGD4Q96M96 766 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 AP5M1Q9H0R1 490 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 LTBP2Q14767 1821 aa25.32■■□□□ 1.64
C9orf3-208ENST00000451893 SOWAHBA6NEL2 793 aa25.31■■□□□ 1.64
C9orf3-208ENST00000451893 RAG1P15918 1043 aa25.31■■□□□ 1.64
C9orf3-208ENST00000451893 PNMA1Q8ND90 353 aa25.31■■□□□ 1.64
C9orf3-208ENST00000451893 BADQ92934 168 aa25.31■■□□□ 1.64
C9orf3-208ENST00000451893 TMEM39AQ9NV64 488 aa25.31■■□□□ 1.64
C9orf3-208ENST00000451893 MROH7Q68CQ1 1323 aa25.31■■□□□ 1.64
C9orf3-208ENST00000451893 ZEB2O60315 1214 aa25.3■■□□□ 1.64
C9orf3-208ENST00000451893 EIF5BO60841 1220 aaKnown RBP25.3■■□□□ 1.64
C9orf3-208ENST00000451893 GOLGA8HP0CJ92 632 aa25.3■■□□□ 1.64
C9orf3-208ENST00000451893 CALML3P27482 149 aa25.3■■□□□ 1.64
C9orf3-208ENST00000451893 TRDNQ13061 729 aa25.3■■□□□ 1.64
C9orf3-208ENST00000451893 BAATQ14032 418 aaPredicted RBP25.3■■□□□ 1.64
C9orf3-208ENST00000451893 KLHDC9Q8NEP7 349 aa25.3■■□□□ 1.64
C9orf3-208ENST00000451893 ZSCAN10Q96SZ4 725 aaPredicted RBP25.3■■□□□ 1.64
C9orf3-208ENST00000451893 RANBP2P49792 3224 aaKnown RBP25.29■■□□□ 1.64
C9orf3-208ENST00000451893 MYADML2A6NDP7 307 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 ASGR1P07306 291 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 GJA9P57773 515 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 USH1GQ495M9 461 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 RNF207Q6ZRF8 634 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 TLK2Q86UE8 772 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 FBXO16Q8IX29 292 aaPredicted RBP25.29■■□□□ 1.64
C9orf3-208ENST00000451893 RAD50Q92878 1312 aa25.29■■□□□ 1.64
C9orf3-208ENST00000451893 MYH6P13533 1939 aa25.28■■□□□ 1.64
C9orf3-208ENST00000451893 CST5P28325 142 aaPredicted RBP25.28■■□□□ 1.64
C9orf3-208ENST00000451893 C8orf34Q49A92 452 aa25.28■■□□□ 1.64
C9orf3-208ENST00000451893 SH3RF1Q7Z6J0 888 aa25.28■■□□□ 1.64
C9orf3-208ENST00000451893 DEFB123Q8N688 67 aa25.28■■□□□ 1.64
C9orf3-208ENST00000451893 TNKSO95271 1327 aa25.28■■□□□ 1.64
C9orf3-208ENST00000451893 A0A0U1RQG5 324 aaPredicted RBP25.27■■□□□ 1.64
C9orf3-208ENST00000451893 B4DLN1 442 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 NFIBO00712 420 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 TLR3O15455 904 aaKnown RBP25.27■■□□□ 1.64
C9orf3-208ENST00000451893 MRPL12P52815 198 aaKnown RBP25.27■■□□□ 1.64
C9orf3-208ENST00000451893 IFIT1BQ5T764 474 aaKnown RBP25.27■■□□□ 1.64
C9orf3-208ENST00000451893 GPR153Q6NV75 609 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 KIAA1211Q6ZU35 1233 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 UBA5Q9GZZ9 404 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 UPF3AQ9H1J1 476 aaKnown RBP25.27■■□□□ 1.64
C9orf3-208ENST00000451893 VTA1Q9NP79 307 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 ELP1O95163 1332 aa25.27■■□□□ 1.64
C9orf3-208ENST00000451893 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-208ENST00000451893 TRIM43BA6NCK2 446 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 ADCY6O43306 1168 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 PARP1P09874 1014 aaKnown RBP25.26■■□□□ 1.63
C9orf3-208ENST00000451893 SNHG28P0DPA3 235 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 GSPT1P15170 499 aaKnown RBP25.26■■□□□ 1.63
C9orf3-208ENST00000451893 ALDH5A1P51649 535 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-208ENST00000451893 BEX3Q00994 111 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 ASPRV1Q53RT3 343 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 IQSEC1Q6DN90 963 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 TRIM43Q96BQ3 446 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-208ENST00000451893 ZSWIM5Q9P217 1185 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 DNAH12Q6ZR08 3092 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 WDR19Q8NEZ3 1342 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 LRRC37A2A6NM11 1700 aa25.26■■□□□ 1.63
C9orf3-208ENST00000451893 DYNC1LI2O43237 492 aaPredicted RBP25.25■■□□□ 1.63
C9orf3-208ENST00000451893 PDE4DQ08499 809 aa25.25■■□□□ 1.63
C9orf3-208ENST00000451893 SLC30A10Q6XR72 485 aa25.25■■□□□ 1.63
C9orf3-208ENST00000451893 TOX2Q96NM4 488 aa25.25■■□□□ 1.63
C9orf3-208ENST00000451893 PURBQ96QR8 312 aaKnown RBP25.25■■□□□ 1.63
C9orf3-208ENST00000451893 KATNBL1Q9H079 304 aa25.25■■□□□ 1.63
C9orf3-208ENST00000451893 ERICH2A1L162 156 aa25.24■■□□□ 1.63
C9orf3-208ENST00000451893 IRX5P78411 483 aaPredicted RBP25.24■■□□□ 1.63
C9orf3-208ENST00000451893 CDC37Q16543 378 aaPredicted RBP25.24■■□□□ 1.63
C9orf3-208ENST00000451893 FSCN1Q16658 493 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms