RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 MCM2P49736 904 aa27.83■■■□□ 2.05
CPSF4-207ENST00000451876 COA7Q96BR5 231 aa27.83■■■□□ 2.05
CPSF4-207ENST00000451876 RNF26Q9BY78 433 aaPredicted RBP27.83■■■□□ 2.05
CPSF4-207ENST00000451876 LCTP09848 1927 aa27.83■■■□□ 2.05
CPSF4-207ENST00000451876 PCDHA1Q9Y5I3 950 aa27.82■■■□□ 2.04
CPSF4-207ENST00000451876 PLXNA1Q9UIW2 1896 aa27.82■■■□□ 2.04
CPSF4-207ENST00000451876 NFIBO00712 420 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 PRPF3O43395 683 aaKnown RBP27.81■■■□□ 2.04
CPSF4-207ENST00000451876 COPB2P35606 906 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 PKN1Q16512 942 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 CPLX2Q6PUV4 134 aaKnown RBP27.81■■■□□ 2.04
CPSF4-207ENST00000451876 PLEKHH3Q7Z736 793 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 CHST13Q8NET6 341 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 CLEC4DQ8WXI8 215 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 GPKOWQ92917 476 aaPredicted RBP eCLIP27.81■■■□□ 2.04
CPSF4-207ENST00000451876 ACAD9Q9H845 621 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 CWC22Q9HCG8 908 aaKnown RBP27.81■■■□□ 2.04
CPSF4-207ENST00000451876 TKFCQ3LXA3 575 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 NSUN7Q8NE18 718 aaKnown RBP27.81■■■□□ 2.04
CPSF4-207ENST00000451876 PNMA2Q9UL42 364 aa27.81■■■□□ 2.04
CPSF4-207ENST00000451876 ABCB11O95342 1321 aa27.8■■■□□ 2.04
CPSF4-207ENST00000451876 WWC2Q6AWC2 1192 aa27.8■■■□□ 2.04
CPSF4-207ENST00000451876 OPLAHO14841 1288 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 JAK2O60674 1132 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 CDKL5O76039 1030 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 PTPREP23469 700 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 SSRP1Q08945 709 aaKnown RBP27.79■■■□□ 2.04
CPSF4-207ENST00000451876 PFKFB3Q16875 520 aaPredicted RBP27.79■■■□□ 2.04
CPSF4-207ENST00000451876 HEATR3Q7Z4Q2 680 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 FBXO40Q9UH90 709 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 IVNS1ABPQ9Y6Y0 642 aa27.79■■■□□ 2.04
CPSF4-207ENST00000451876 GRB14Q14449 540 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 TYW1BQ6NUM6 668 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 TRIM22Q8IYM9 498 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 A1CFQ9NQ94 594 aaKnown RBP27.78■■■□□ 2.04
CPSF4-207ENST00000451876 GABRQQ9UN88 632 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 PTPDC1A2A3K4 754 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 FCER1AP12319 257 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 SCG2P13521 617 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 PRKCZQ05513 592 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 MORN1Q5T089 497 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.78■■■□□ 2.04
CPSF4-207ENST00000451876 OTOP1Q7RTM1 612 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 MMP19Q99542 508 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 RBM27Q9P2N5 1060 aaKnown RBP27.78■■■□□ 2.04
CPSF4-207ENST00000451876 GJD2Q9UKL4 321 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 TRIM17Q9Y577 477 aa27.78■■■□□ 2.04
CPSF4-207ENST00000451876 STRNO43815 780 aa27.77■■■□□ 2.04
CPSF4-207ENST00000451876 FDPSP14324 419 aaKnown RBP27.77■■■□□ 2.04
CPSF4-207ENST00000451876 ADORA2AP29274 412 aa27.77■■■□□ 2.04
CPSF4-207ENST00000451876 AKAP17AQ02040 695 aaKnown RBP27.77■■■□□ 2.04
CPSF4-207ENST00000451876 SNX21Q969T3 373 aa27.77■■■□□ 2.04
CPSF4-207ENST00000451876 AIFM3Q96NN9 605 aa27.77■■■□□ 2.04
CPSF4-207ENST00000451876 MRPL11Q9Y3B7 192 aaKnown RBP27.77■■■□□ 2.04
CPSF4-207ENST00000451876 STK36Q9NRP7 1315 aa27.76■■■□□ 2.03
CPSF4-207ENST00000451876 KCTD2Q14681 263 aa27.76■■■□□ 2.03
CPSF4-207ENST00000451876 NSMFQ6X4W1 530 aa27.76■■■□□ 2.03
CPSF4-207ENST00000451876 ANKRD35Q8N283 1001 aa27.76■■■□□ 2.03
CPSF4-207ENST00000451876 TBC1D5Q92609 795 aa27.76■■■□□ 2.03
CPSF4-207ENST00000451876 SHISA4Q96DD7 197 aa27.76■■■□□ 2.03
CPSF4-207ENST00000451876 STXBP3O00186 592 aa27.75■■■□□ 2.03
CPSF4-207ENST00000451876 DEXIO95424 95 aa27.75■■■□□ 2.03
CPSF4-207ENST00000451876 ABRAQ8N0Z2 381 aa27.75■■■□□ 2.03
CPSF4-207ENST00000451876 DDX11Q96FC9 970 aa27.75■■■□□ 2.03
CPSF4-207ENST00000451876 BARHL2Q9NY43 387 aa27.75■■■□□ 2.03
CPSF4-207ENST00000451876 SRRDQ9UH36 339 aa27.75■■■□□ 2.03
CPSF4-207ENST00000451876 SLC15A5A6NIM6 579 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 GNRH1P01148 92 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 PGK2P07205 417 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 FLT3LGP49771 235 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 TRAF1Q13077 416 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 SLC30A10Q6XR72 485 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 SOCS4Q8WXH5 440 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 USP6NLQ92738 828 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 NUDT12Q9BQG2 462 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 PRDM10Q9NQV6 1147 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 CYP39A1Q9NYL5 469 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 ORC3Q9UBD5 711 aaPredicted RBP27.74■■■□□ 2.03
CPSF4-207ENST00000451876 K7ELQ4 463 aaPredicted RBP27.74■■■□□ 2.03
CPSF4-207ENST00000451876 COBLO75128 1261 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 SMARCC2Q8TAQ2 1214 aa27.74■■■□□ 2.03
CPSF4-207ENST00000451876 NAPAP54920 295 aa27.73■■■□□ 2.03
CPSF4-207ENST00000451876 ARHGEF6Q15052 776 aa27.73■■■□□ 2.03
CPSF4-207ENST00000451876 LLPHQ9BRT6 129 aaKnown RBP27.73■■■□□ 2.03
CPSF4-207ENST00000451876 DNAJC25-GNG10A0A024R161 153 aa27.72■■■□□ 2.03
CPSF4-207ENST00000451876 hCG_1984214I3L0E3 225 aa27.72■■■□□ 2.03
CPSF4-207ENST00000451876 RPS6P62753 249 aaKnown RBP27.72■■■□□ 2.03
CPSF4-207ENST00000451876 MAP2K5Q13163 448 aa27.72■■■□□ 2.03
CPSF4-207ENST00000451876 BAATQ14032 418 aaPredicted RBP27.72■■■□□ 2.03
CPSF4-207ENST00000451876 RNF207Q6ZRF8 634 aa27.72■■■□□ 2.03
CPSF4-207ENST00000451876 ZNF713Q8N859 430 aaPredicted RBP27.72■■■□□ 2.03
CPSF4-207ENST00000451876 PURBQ96QR8 312 aaKnown RBP27.72■■■□□ 2.03
CPSF4-207ENST00000451876 VPS54Q9P1Q0 977 aa27.72■■■□□ 2.03
CPSF4-207ENST00000451876 PFASO15067 1338 aa27.72■■■□□ 2.03
CPSF4-207ENST00000451876 CFBP00751 764 aa27.71■■■□□ 2.03
CPSF4-207ENST00000451876 CYP2B6P20813 491 aa27.71■■■□□ 2.03
CPSF4-207ENST00000451876 HOXD10P28358 340 aa27.71■■■□□ 2.03
CPSF4-207ENST00000451876 CTU1Q7Z7A3 348 aaKnown RBP27.71■■■□□ 2.03
CPSF4-207ENST00000451876 MCM3APO60318 1980 aa27.71■■■□□ 2.03
CPSF4-207ENST00000451876 CUL4AQ13619 759 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms