RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 SLC35G1Q2M3R5 365 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 FANCBQ8NB91 859 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
TOP3B-211ENST00000449704 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
TOP3B-211ENST00000449704 DIS3Q9Y2L1 958 aaKnown RBP18.26■□□□□ 0.51
TOP3B-211ENST00000449704 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
TOP3B-211ENST00000449704 DNAJC25-GNG10A0A024R161 153 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 NFIBO00712 420 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 ZBTB5O15062 677 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 ZBTB43O43298 467 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 GJB1P08034 283 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 CNTN2Q02246 1040 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 BAATQ14032 418 aaPredicted RBP18.25■□□□□ 0.51
TOP3B-211ENST00000449704 MAP3K21Q5TCX8 1036 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 APOA5Q6Q788 366 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 BRF1Q92994 677 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 DEFB118Q96PH6 123 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 PIGSQ96S52 555 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 CYP39A1Q9NYL5 469 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 CYP46A1Q9Y6A2 500 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 PLXNB2O15031 1838 aa18.25■□□□□ 0.51
TOP3B-211ENST00000449704 PFASO15067 1338 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 CYTH3O43739 400 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 PLEKHA8P1O95397 391 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 CNGA1P29973 690 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 CCND3P30281 292 aaPredicted RBP18.24■□□□□ 0.51
TOP3B-211ENST00000449704 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 PRAMEF19Q5SWL8 479 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 CMTR1Q8N1G2 835 aaKnown RBP18.24■□□□□ 0.51
TOP3B-211ENST00000449704 CLEC4DQ8WXI8 215 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 MTMR8Q96EF0 704 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 LZTS2Q9BRK4 669 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 TINF2Q9BSI4 451 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 AMNQ9BXJ7 453 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 UPF3BQ9BZI7 483 aaKnown RBP18.24■□□□□ 0.51
TOP3B-211ENST00000449704 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
TOP3B-211ENST00000449704 CENPFP49454 3210 aa18.24■□□□□ 0.51
TOP3B-211ENST00000449704 ABCB11O95342 1321 aa18.23■□□□□ 0.51
TOP3B-211ENST00000449704 TFRCP02786 760 aaKnown RBP18.23■□□□□ 0.51
TOP3B-211ENST00000449704 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
TOP3B-211ENST00000449704 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
TOP3B-211ENST00000449704 SRBD1Q8N5C6 995 aaKnown RBP18.23■□□□□ 0.51
TOP3B-211ENST00000449704 FAM133AQ8N9E0 248 aa18.23■□□□□ 0.51
TOP3B-211ENST00000449704 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
TOP3B-211ENST00000449704 TM6SF1Q9BZW5 370 aa18.23■□□□□ 0.51
TOP3B-211ENST00000449704 MRPL11Q9Y3B7 192 aaKnown RBP18.23■□□□□ 0.51
TOP3B-211ENST00000449704 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
TOP3B-211ENST00000449704 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 GOLGA8AA7E2F4 631 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 GOLGA8BA8MQT2 603 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
TOP3B-211ENST00000449704 SGPL1O95470 568 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 IGHA2P01877 340 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 CALML3P27482 149 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 GJA8P48165 433 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 RTN1Q16799 776 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 RNF207Q6ZRF8 634 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 TRPV1Q8NER1 839 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 RRP36Q96EU6 259 aaKnown RBP18.22■□□□□ 0.51
TOP3B-211ENST00000449704 SPZ1Q9BXG8 430 aa18.22■□□□□ 0.51
TOP3B-211ENST00000449704 SOWAHBA6NEL2 793 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 CYBAP13498 195 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 SMARCA1P28370 1054 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 ANAPC15P60006 121 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 TMTC3Q6ZXV5 915 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 ZNF467Q7Z7K2 595 aaPredicted RBP18.21■□□□□ 0.51
TOP3B-211ENST00000449704 MSL3Q8N5Y2 521 aaKnown RBP18.21■□□□□ 0.51
TOP3B-211ENST00000449704 FGD4Q96M96 766 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 PURBQ96QR8 312 aaKnown RBP18.21■□□□□ 0.51
TOP3B-211ENST00000449704 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 RBM28Q9NW13 759 aaKnown RBP18.21■□□□□ 0.51
TOP3B-211ENST00000449704 SEC63Q9UGP8 760 aaKnown RBP18.21■□□□□ 0.51
TOP3B-211ENST00000449704 CNPY2Q9Y2B0 182 aa18.21■□□□□ 0.51
TOP3B-211ENST00000449704 METAP2P50579 478 aaKnown RBP eCLIP18.2■□□□□ 0.5
TOP3B-211ENST00000449704 RPS6P62753 249 aaKnown RBP18.2■□□□□ 0.5
TOP3B-211ENST00000449704 TRAF1Q13077 416 aa18.2■□□□□ 0.5
TOP3B-211ENST00000449704 MAMDC4Q6UXC1 1216 aa18.2■□□□□ 0.5
TOP3B-211ENST00000449704 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
TOP3B-211ENST00000449704 FBXL16Q8N461 479 aa18.2■□□□□ 0.5
TOP3B-211ENST00000449704 TBC1D5Q92609 795 aa18.2■□□□□ 0.5
TOP3B-211ENST00000449704 ZNF236Q9UL36 1845 aa18.2■□□□□ 0.5
TOP3B-211ENST00000449704 hCG_1642624A0A1W2PR95 340 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 ASB14A6NK59 587 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 SNAI1O95863 264 aaPredicted RBP18.19■□□□□ 0.5
TOP3B-211ENST00000449704 ARMCX2Q7L311 632 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 RGS22Q8NE09 1264 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 SHISA4Q96DD7 197 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
TOP3B-211ENST00000449704 AGXT2Q9BYV1 514 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.19■□□□□ 0.5
TOP3B-211ENST00000449704 NRBP1Q9UHY1 535 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 ZHX1Q9UKY1 873 aaPredicted RBP18.19■□□□□ 0.5
TOP3B-211ENST00000449704 SYNGAP1Q96PV0 1343 aa18.19■□□□□ 0.5
TOP3B-211ENST00000449704 TNRC18O15417 2968 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms