RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 HIP1O00291 1037 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 TIMP1P01033 207 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 ASGR1P07306 291 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 TOP1P11387 765 aaKnown RBP8.13□□□□□ -1.11
PBRM1-216ENST00000449505 FOSL2P15408 326 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 PDE1AP54750 535 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 TNFAIP2Q03169 654 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 MCMDC2Q4G0Z9 681 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 CCDC178Q5BJE1 867 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 C9orf50Q5SZB4 431 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 MFSD5Q6N075 450 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 NSMFQ6X4W1 530 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 KCTD1Q719H9 257 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.13□□□□□ -1.11
PBRM1-216ENST00000449505 OTUD7AQ8TE49 926 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-216ENST00000449505 TRIM43Q96BQ3 446 aaPredicted RBP8.13□□□□□ -1.11
PBRM1-216ENST00000449505 TBX21Q9UL17 535 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 PRR12Q9ULL5 1215 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 Q9Y3F1 56 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 LAMA4Q16363 1823 aa8.13□□□□□ -1.11
PBRM1-216ENST00000449505 ZNF536O15090 1300 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 WDR19Q8NEZ3 1342 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 TRIM6-TRIM34B2RNG4 842 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 CPT1AP50416 773 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 NKX3-2P78367 333 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 CTDSPL2Q05D32 466 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 FSCN1Q16658 493 aaKnown RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 RRP12Q5JTH9 1297 aaKnown RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 GPATCH4Q5T3I0 446 aaKnown RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 SYDE2Q5VT97 1194 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 CCSAPQ6IQ19 270 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 MFSD6Q6ZSS7 791 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 ESR2Q92731 530 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 FGD4Q96M96 766 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 FAM161BQ96MY7 647 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 TTC14Q96N46 770 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 GUCD1Q96NT3 240 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 MAF1Q9H063 256 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 RANBP17Q9H2T7 1088 aaKnown RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 RWDD1Q9H446 243 aaPredicted RBP8.12□□□□□ -1.11
PBRM1-216ENST00000449505 TCP11L1Q9NUJ3 509 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 CYP39A1Q9NYL5 469 aa8.12□□□□□ -1.11
PBRM1-216ENST00000449505 FGRP09769 529 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 DNAJB2P25686 324 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 NOVP48745 357 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 CNTN2Q02246 1040 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 RAB30Q15771 203 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 BTNL9Q6UXG8 535 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 IQCA1Q86XH1 822 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 FAM126BQ8IXS8 530 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 MAFAQ8NHW3 353 aaPredicted RBP8.11□□□□□ -1.11
PBRM1-216ENST00000449505 CRBNQ96SW2 442 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 KATNBL1Q9H079 304 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
PBRM1-216ENST00000449505 DIAPH3Q9NSV4 1193 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 POLR3EQ9NVU0 708 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 MTMR7Q9Y216 660 aa8.11□□□□□ -1.11
PBRM1-216ENST00000449505 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 PTPDC1A2A3K4 754 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 MYADML2A6NDP7 307 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 SOWAHBA6NEL2 793 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 NKRFO15226 690 aaKnown RBP eCLIP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 FOXP2O15409 715 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 NMT2O60551 498 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 FGAP02671 866 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 PFKMP08237 780 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 SUPT20HL2P0C7V6 817 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 HSPD1P10809 573 aaKnown RBP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 CDK7P50613 346 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 ALDH5A1P51649 535 aaPredicted RBP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 PDE4DQ08499 809 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 ITGA7Q13683 1181 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 PPP2R5BQ15173 497 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 VPS53Q5VIR6 699 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 RNF207Q6ZRF8 634 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 FBXO16Q8IX29 292 aaPredicted RBP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 MORC4Q8TE76 937 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 RILPL2Q969X0 211 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 TIFAQ96CG3 184 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 GAS2L1Q99501 681 aaPredicted RBP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 CDX2Q99626 313 aaPredicted RBP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 TMEM47Q9BQJ4 181 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 SEMA6BQ9H3T3 888 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 HIPK3Q9H422 1215 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 IL17RBQ9NRM6 502 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 GNEQ9Y223 722 aaKnown RBP8.1□□□□□ -1.11
PBRM1-216ENST00000449505 CDH23Q9H251 3354 aa8.1□□□□□ -1.11
PBRM1-216ENST00000449505 ZNF213O14771 459 aa8.09□□□□□ -1.11
PBRM1-216ENST00000449505 DYNC1LI2O43237 492 aaPredicted RBP8.09□□□□□ -1.11
PBRM1-216ENST00000449505 ADCY6O43306 1168 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms