RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 MROH8Q9H579 483 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
SMPD4-211ENST00000449159 RNF146Q9NTX7 359 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 GJD2Q9UKL4 321 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 CNTNAP5Q8WYK1 1306 aa12.35□□□□□ -0.43
SMPD4-211ENST00000449159 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 LARGE1O95461 756 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 GNRH1P01148 92 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 PTPREP23469 700 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 FXR1P51114 621 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMPD4-211ENST00000449159 FUT2Q10981 343 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 STK3Q13188 491 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 GRB14Q14449 540 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 MORN1Q5T089 497 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 USP6NLQ92738 828 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
SMPD4-211ENST00000449159 RBM28Q9NW13 759 aaKnown RBP12.34□□□□□ -0.43
SMPD4-211ENST00000449159 SLC15A5A6NIM6 579 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 NFIBO00712 420 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 ZBTB5O15062 677 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 DTNBO60941 627 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 PGK2P07205 417 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 FCER1AP12319 257 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 ADORA2AP29274 412 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 COPB2P35606 906 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 GNAQP50148 359 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 ZNF274Q96GC6 653 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-211ENST00000449159 MMP19Q99542 508 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 ACAD9Q9H845 621 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 IVNS1ABPQ9Y6Y0 642 aa12.33□□□□□ -0.44
SMPD4-211ENST00000449159 PNMA6FA0A0J9YX94 578 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 COBLO75128 1261 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
SMPD4-211ENST00000449159 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-211ENST00000449159 ELNP15502 786 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 CYP2B6P20813 491 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 HOXD10P28358 340 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 SMARCA1P28370 1054 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 PRMT2P55345 433 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 KCTD2Q14681 263 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 RABEP1Q15276 862 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 ANKRD1Q15327 319 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 NTRK3Q16288 839 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 ME3Q16798 604 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 CHST13Q8NET6 341 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 SH3TC2Q8TF17 1288 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 CLEC4DQ8WXI8 215 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 PHKBQ93100 1093 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 RRP36Q96EU6 259 aaKnown RBP12.32□□□□□ -0.44
SMPD4-211ENST00000449159 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 AMNQ9BXJ7 453 aa12.32□□□□□ -0.44
SMPD4-211ENST00000449159 A1CFQ9NQ94 594 aaKnown RBP12.32□□□□□ -0.44
SMPD4-211ENST00000449159 LRRC37A2A6NM11 1700 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 OPLAHO14841 1288 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 STRNO43815 780 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 PFKFB2O60825 505 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 SCRN1Q12765 414 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 CCL14Q16627 93 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 TKFCQ3LXA3 575 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
SMPD4-211ENST00000449159 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 ANKRD35Q8N283 1001 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 NECAB1Q8N987 351 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 NPLOC4Q8TAT6 608 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 FLRT1Q9NZU1 646 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 FBXO40Q9UH90 709 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 PCDHA1Q9Y5I3 950 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 ABCB11O95342 1321 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 ALPK3Q96L96 1907 aa12.31□□□□□ -0.44
SMPD4-211ENST00000449159 CCDC196A0A1B0GTZ2 297 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 ADCY3O60266 1144 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 HOXC6P09630 235 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 RGS2P41220 211 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 CNTN2Q02246 1040 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 ST3GAL1Q11201 340 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 IRF5Q13568 498 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 PPP2R5BQ15173 497 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 TRIB2Q92519 343 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
SMPD4-211ENST00000449159 PURBQ96QR8 312 aaKnown RBP12.3□□□□□ -0.44
SMPD4-211ENST00000449159 APBA2Q99767 749 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-211ENST00000449159 CYP39A1Q9NYL5 469 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 SEC63Q9UGP8 760 aaKnown RBP12.3□□□□□ -0.44
SMPD4-211ENST00000449159 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-211ENST00000449159 V9GY48 417 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-211ENST00000449159 ASTN1O14525 1302 aa12.3□□□□□ -0.44
SMPD4-211ENST00000449159 DNAJC25-GNG10A0A024R161 153 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 H0YGN5 161 aa12.29□□□□□ -0.44
SMPD4-211ENST00000449159 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms