RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 DOCK3Q8IZD9 2030 aa16.28■□□□□ 0.2
GTF3C3-206ENST00000448539 PFASO15067 1338 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 ABCB11O95342 1321 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 ZBTB5O15062 677 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 SMARCA1P28370 1054 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 APOBRQ0VD83 1088 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 CCL14Q16627 93 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 RTN1Q16799 776 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 MUM1L1Q5H9M0 696 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 NSMFQ6X4W1 530 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 RRP36Q96EU6 259 aaKnown RBP16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 AMNQ9BXJ7 453 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 RIOX1Q9H6W3 641 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 PDRG1Q9NUG6 133 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 BRPF3Q9ULD4 1205 aa16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 DIS3Q9Y2L1 958 aaKnown RBP16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 RBBP6Q7Z6E9 1792 aaKnown RBP16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 MKI67P46013 3256 aaKnown RBP16.27■□□□□ 0.2
GTF3C3-206ENST00000448539 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 TAL1P17542 331 aaPredicted RBP16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 RCAN1P53805 252 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 OLFML2BQ68BL8 750 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 PIGSQ96S52 555 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 RNF208Q9H0X6 261 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 A1CFQ9NQ94 594 aaKnown RBP16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 MRPL11Q9Y3B7 192 aaKnown RBP16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
GTF3C3-206ENST00000448539 PNMA6FA0A0J9YX94 578 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 CCDC196A0A1B0GTZ2 297 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 PTPDC1A2A3K4 754 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 CCL5P13501 91 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 PPP2R5BQ15173 497 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 MTFR1Q15390 333 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 ZNF792Q3KQV3 632 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 MTMR8Q96EF0 704 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 MAML3Q96JK9 1138 aa16.25■□□□□ 0.19
GTF3C3-206ENST00000448539 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 NFIBO00712 420 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 CYTH3O43739 400 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 TRIM32Q13049 653 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 MCF2L2Q86YR7 1114 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 SRBD1Q8N5C6 995 aaKnown RBP16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 CLEC4DQ8WXI8 215 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 UNC93B1Q9H1C4 597 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 HMX1Q9NP08 348 aaPredicted RBP16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 CYP39A1Q9NYL5 469 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 FLRT1Q9NZU1 646 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 PCDHA1Q9Y5I3 950 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 ZNF236Q9UL36 1845 aa16.24■□□□□ 0.19
GTF3C3-206ENST00000448539 RPTORQ8N122 1335 aa16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 CALML3P27482 149 aa16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 CYP2C19P33261 490 aa16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 BAATQ14032 418 aaPredicted RBP16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 ANKRD1Q15327 319 aa16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 SLC35G1Q2M3R5 365 aa16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 PRPF38BQ5VTL8 546 aaKnown RBP16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 CMTR1Q8N1G2 835 aaKnown RBP16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 C22orf23Q9BZE7 217 aa16.23■□□□□ 0.19
GTF3C3-206ENST00000448539 PDE4DIPQ5VU43 2346 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 EN2P19622 333 aaPredicted RBP16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 CNGA1P29973 690 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 TOB2Q14106 344 aaPredicted RBP16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 RGS22Q8NE09 1264 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 TINF2Q9BSI4 451 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 MAF1Q9H063 256 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 CNPY2Q9Y2B0 182 aa16.22■□□□□ 0.19
GTF3C3-206ENST00000448539 ASB14A6NK59 587 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 PPP1R11O60927 126 aaPredicted RBP16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 SLC34A2O95436 690 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 NEK4P51957 841 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 EVCP57679 992 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 RPS6P62753 249 aaKnown RBP16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 CNTN2Q02246 1040 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 MAP3K21Q5TCX8 1036 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 FAM133AQ8N9E0 248 aa16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
GTF3C3-206ENST00000448539 SYNGAP1Q96PV0 1343 aa16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 CFBP00751 764 aa16.2■□□□□ 0.18
GTF3C3-206ENST00000448539 GJB1P08034 283 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms