RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SNHG28P0DPA3 235 aa23.09■■□□□ 1.29
VCP-203ENST00000448530 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
VCP-203ENST00000448530 NOL8Q76FK4 1167 aaKnown RBP23.09■■□□□ 1.29
VCP-203ENST00000448530 PNMA1Q8ND90 353 aa23.09■■□□□ 1.29
VCP-203ENST00000448530 NUP133Q8WUM0 1156 aa23.09■■□□□ 1.29
VCP-203ENST00000448530 UBAC1Q9BSL1 405 aa23.09■■□□□ 1.29
VCP-203ENST00000448530 MOXD2PA6NHM9 499 aa23.08■■□□□ 1.29
VCP-203ENST00000448530 C6orf222P0C671 652 aaPredicted RBP23.08■■□□□ 1.29
VCP-203ENST00000448530 ACLYP53396 1101 aa23.08■■□□□ 1.29
VCP-203ENST00000448530 ZSWIM5Q9P217 1185 aa23.08■■□□□ 1.29
VCP-203ENST00000448530 ADD3Q9UEY8 706 aaKnown RBP23.08■■□□□ 1.29
VCP-203ENST00000448530 PTPDC1A2A3K4 754 aa23.07■■□□□ 1.28
VCP-203ENST00000448530 GOLGA8HP0CJ92 632 aa23.07■■□□□ 1.28
VCP-203ENST00000448530 KCNA10Q16322 511 aa23.07■■□□□ 1.28
VCP-203ENST00000448530 PCSK9Q8NBP7 692 aaKnown RBP23.07■■□□□ 1.28
VCP-203ENST00000448530 STARD7Q9NQZ5 370 aa23.07■■□□□ 1.28
VCP-203ENST00000448530 TNKSO95271 1327 aa23.07■■□□□ 1.28
VCP-203ENST00000448530 CHMLP26374 656 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 TNFAIP2Q03169 654 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 TLE2Q04725 743 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 TRDNQ13061 729 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 BAATQ14032 418 aaPredicted RBP23.06■■□□□ 1.28
VCP-203ENST00000448530 ENAHQ8N8S7 591 aaPredicted RBP23.06■■□□□ 1.28
VCP-203ENST00000448530 KLHDC9Q8NEP7 349 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 ANKS1AQ92625 1134 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 IL25Q9H293 177 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 WDR19Q8NEZ3 1342 aa23.06■■□□□ 1.28
VCP-203ENST00000448530 NFIBO00712 420 aa23.05■■□□□ 1.28
VCP-203ENST00000448530 CST5P28325 142 aaPredicted RBP23.05■■□□□ 1.28
VCP-203ENST00000448530 GNASQ5JWF2 1037 aa23.05■■□□□ 1.28
VCP-203ENST00000448530 VTI1AQ96AJ9 217 aa23.05■■□□□ 1.28
VCP-203ENST00000448530 GLT1D1Q96MS3 346 aa23.05■■□□□ 1.28
VCP-203ENST00000448530 KATNBL1Q9H079 304 aa23.05■■□□□ 1.28
VCP-203ENST00000448530 UPF3AQ9H1J1 476 aaKnown RBP23.05■■□□□ 1.28
VCP-203ENST00000448530 U3KPZ7 1027 aaPredicted RBP23.05■■□□□ 1.28
VCP-203ENST00000448530 SOX1O00570 391 aaPredicted RBP23.04■■□□□ 1.28
VCP-203ENST00000448530 PQBP1O60828 265 aaKnown RBP23.04■■□□□ 1.28
VCP-203ENST00000448530 GJA9P57773 515 aa23.04■■□□□ 1.28
VCP-203ENST00000448530 ASPRV1Q53RT3 343 aa23.04■■□□□ 1.28
VCP-203ENST00000448530 IFIT1BQ5T764 474 aaKnown RBP23.04■■□□□ 1.28
VCP-203ENST00000448530 RNF207Q6ZRF8 634 aa23.04■■□□□ 1.28
VCP-203ENST00000448530 LRCH3Q96II8 777 aa23.04■■□□□ 1.28
VCP-203ENST00000448530 UBA5Q9GZZ9 404 aa23.04■■□□□ 1.28
VCP-203ENST00000448530 PDLIM7Q9NR12 457 aa23.04■■□□□ 1.28
VCP-203ENST00000448530 LTBP2Q14767 1821 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 MYADML2A6NDP7 307 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 ADCY6O43306 1168 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 DHX16O60231 1041 aaKnown RBP23.03■■□□□ 1.28
VCP-203ENST00000448530 CLTBP09497 229 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 PARP1P09874 1014 aaKnown RBP23.03■■□□□ 1.28
VCP-203ENST00000448530 CALML3P27482 149 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 LRIT3Q3SXY7 679 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 EEPD1Q7L9B9 569 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 MPHOSPH6Q99547 160 aaKnown RBP23.03■■□□□ 1.28
VCP-203ENST00000448530 AP5M1Q9H0R1 490 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 VTA1Q9NP79 307 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 ASTN1O14525 1302 aa23.03■■□□□ 1.28
VCP-203ENST00000448530 LRRC37A2A6NM11 1700 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 LCTP09848 1927 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 LOC102724159A0A0B4J2E5 919 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 DCDC2CA8MYV0 355 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 ASGR1P07306 291 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 ALDH5A1P51649 535 aaPredicted RBP23.02■■□□□ 1.28
VCP-203ENST00000448530 PWP2Q15269 919 aaKnown RBP23.02■■□□□ 1.28
VCP-203ENST00000448530 USH1GQ495M9 461 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 IQSEC1Q6DN90 963 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 CCSAPQ6IQ19 270 aaPredicted RBP23.02■■□□□ 1.28
VCP-203ENST00000448530 FBXO16Q8IX29 292 aaPredicted RBP23.02■■□□□ 1.28
VCP-203ENST00000448530 CLEC4DQ8WXI8 215 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 PURBQ96QR8 312 aaKnown RBP23.02■■□□□ 1.28
VCP-203ENST00000448530 CPVLQ9H3G5 476 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 ELP1O95163 1332 aa23.02■■□□□ 1.28
VCP-203ENST00000448530 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.01■■□□□ 1.27
VCP-203ENST00000448530 PTH1RQ03431 593 aa23.01■■□□□ 1.27
VCP-203ENST00000448530 CDC37Q16543 378 aaPredicted RBP23.01■■□□□ 1.27
VCP-203ENST00000448530 SLC30A10Q6XR72 485 aa23.01■■□□□ 1.27
VCP-203ENST00000448530 SH3RF1Q7Z6J0 888 aa23.01■■□□□ 1.27
VCP-203ENST00000448530 TLK2Q86UE8 772 aa23.01■■□□□ 1.27
VCP-203ENST00000448530 DDX49Q9Y6V7 483 aaKnown RBP23.01■■□□□ 1.27
VCP-203ENST00000448530 MYH6P13533 1939 aa23.01■■□□□ 1.27
VCP-203ENST00000448530 B4DLN1 442 aa23■■□□□ 1.27
VCP-203ENST00000448530 SGSM2O43147 1006 aa23■■□□□ 1.27
VCP-203ENST00000448530 MRPL12P52815 198 aaKnown RBP23■■□□□ 1.27
VCP-203ENST00000448530 IRX5P78411 483 aaPredicted RBP23■■□□□ 1.27
VCP-203ENST00000448530 KIAA1211Q6ZU35 1233 aa23■■□□□ 1.27
VCP-203ENST00000448530 RALYLQ86SE5 291 aaKnown RBP23■■□□□ 1.27
VCP-203ENST00000448530 ADGRF4Q8IZF3 695 aa23■■□□□ 1.27
VCP-203ENST00000448530 MORC4Q8TE76 937 aa23■■□□□ 1.27
VCP-203ENST00000448530 BADQ92934 168 aa23■■□□□ 1.27
VCP-203ENST00000448530 TMEM39AQ9NV64 488 aa23■■□□□ 1.27
VCP-203ENST00000448530 MROH7Q68CQ1 1323 aa23■■□□□ 1.27
VCP-203ENST00000448530 ERICH2A1L162 156 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 TRIM43BA6NCK2 446 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 DYNC1LI2O43237 492 aaPredicted RBP22.99■■□□□ 1.27
VCP-203ENST00000448530 ZEB2O60315 1214 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 CYP21A2P08686 494 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 RAG1P15918 1043 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 RPS6P62753 249 aaKnown RBP22.99■■□□□ 1.27
VCP-203ENST00000448530 TAPT1Q6NXT6 567 aa22.99■■□□□ 1.27
VCP-203ENST00000448530 CYB5R4Q7L1T6 521 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms