RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 SLAIN1Q8ND83 568 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 TRERF1Q96PN7 1200 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 SPZ1Q9BXG8 430 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 AMNQ9BXJ7 453 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 RNF146Q9NTX7 359 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 RIPK3Q9Y572 518 aa15.18■□□□□ 0.02
ERGIC3-209ENST00000447986 ADCY3O60266 1144 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 XRCC5P13010 732 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 CYP2B6P20813 491 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 QRICH1Q2TAL8 776 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 HOMER1Q86YM7 354 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 PXYLP1Q8TE99 480 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 RRP36Q96EU6 259 aaKnown RBP15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 APBA2Q99767 749 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 ALDH8A1Q9H2A2 487 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 ZSWIM8A7E2V4 1837 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 GRK4P32298 578 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 NEK4P51957 841 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 EVCP57679 992 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 TOB2Q14106 344 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 USH1GQ495M9 461 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 HPS5Q9UPZ3 1129 aa15.17■□□□□ 0.02
ERGIC3-209ENST00000447986 PFASO15067 1338 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 ABCB11O95342 1321 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 PLEKHA8P1O95397 391 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 HOXC6P09630 235 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 TMTC3Q6ZXV5 915 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 USP6NLQ92738 828 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 MTMR8Q96EF0 704 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 PIGSQ96S52 555 aa15.16■□□□□ 0.02
ERGIC3-209ENST00000447986 CYTH3O43739 400 aa15.15■□□□□ 0.02
ERGIC3-209ENST00000447986 UBXN2AP68543 259 aa15.15■□□□□ 0.02
ERGIC3-209ENST00000447986 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
ERGIC3-209ENST00000447986 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-209ENST00000447986 MAF1Q9H063 256 aa15.15■□□□□ 0.02
ERGIC3-209ENST00000447986 MRPL11Q9Y3B7 192 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-209ENST00000447986 PDIA3P30101 505 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 AK2P54819 239 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 MCF2L2Q86YR7 1114 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 DIS3Q9Y2L1 958 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 NID2Q14112 1375 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 CPLX1O14810 134 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 HMGCRP04035 888 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 PGK2P07205 417 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 CPLX2Q6PUV4 134 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 PIBF1Q8WXW3 757 aa15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 A1CFQ9NQ94 594 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
ERGIC3-209ENST00000447986 ZNF236Q9UL36 1845 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 PLXNB2O15031 1838 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 PTPDC1A2A3K4 754 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 POTEB2H3BUK9 544 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 ELNP15502 786 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 CDC27P30260 824 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 CCT2P78371 535 aaKnown RBP15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 AKAP17AQ02040 695 aaKnown RBP15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 RABEP1Q15276 862 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 MFSD14CQ5VZR4 134 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 SH3TC2Q8TF17 1288 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 ABHD8Q96I13 439 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 TBC1D32Q96NH3 1257 aa15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
ERGIC3-209ENST00000447986 NFIBO00712 420 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 COBLO75128 1261 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 ADD1P35611 737 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 SLC35G1Q2M3R5 365 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 OLFML2BQ68BL8 750 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 RNF207Q6ZRF8 634 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 RGS22Q8NE09 1264 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 NPLOC4Q8TAT6 608 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 TRIB2Q92519 343 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 ARMC5Q96C12 935 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 MAML3Q96JK9 1138 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 FAM217BQ9NTX9 383 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 CYP39A1Q9NYL5 469 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 CNTNAP5Q8WYK1 1306 aa15.12■□□□□ 0.01
ERGIC3-209ENST00000447986 DNAJC25-GNG10A0A024R161 153 aa15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 ST18O60284 1047 aa15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 STK3Q13188 491 aa15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 ZNF792Q3KQV3 632 aa15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 MSL3Q8N5Y2 521 aaKnown RBP15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 SAMD3Q8N6K7 520 aa15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 CLEC4DQ8WXI8 215 aa15.11■□□□□ 0.01
ERGIC3-209ENST00000447986 MPHOSPH6Q99547 160 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms