RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 ZFYVE28Q9HCC9 887 aa12.15□□□□□ -0.46
NFRKB-201ENST00000446488 KCNH3Q9ULD8 1083 aa12.15□□□□□ -0.46
NFRKB-201ENST00000446488 SORBS3O60504 671 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 LMNB1P20700 586 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 TAF1CQ15572 869 aaPredicted RBP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 GABPB2Q8TAK5 448 aaPredicted RBP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 LRRIQ4A6NIV6 560 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 ZNF202O95125 648 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 PROCA1Q8NCQ7 364 aaPredicted RBP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 LMTK2Q8IWU2 1503 aa12.14□□□□□ -0.47
NFRKB-201ENST00000446488 RIMS1Q86UR5 1692 aaKnown RBP12.14□□□□□ -0.47
NFRKB-201ENST00000446488 EFCAB8A8MWE9 144 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 GH2P01242 217 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 ARL1P40616 181 aaPredicted RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 METTL23Q86XA0 190 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 ZNF577Q9BSK1 485 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 NOC4LQ9BVI4 516 aaKnown RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 KCNJ14Q9UNX9 436 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 Q3C1V9 767 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 GIMAP8Q8ND71 665 aaPredicted RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 CELF1Q92879 486 aaKnown RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 SLF1Q9BQI6 1058 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 DCCP43146 1447 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 RGS12O14924 1447 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 STK10O94804 968 aaKnown RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 GCFC2P16383 781 aaKnown RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 GPSM2P81274 684 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 LRRC8AQ8IWT6 810 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 SEPT9Q9UHD8 586 aaPredicted RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 MYL3P08590 195 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 BCRP11274 1271 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 PKP1Q13835 747 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 ERCC6LQ2NKX8 1250 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 XPO4Q9C0E2 1151 aaKnown RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 MIS12Q9H081 205 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 ZMYM6O95789 1325 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
NFRKB-201ENST00000446488 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
NFRKB-201ENST00000446488 GOLGA6BA6NDN3 693 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 TMEM110-MUSTN1A8MSY1 372 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 OR52Z1P0C646 297 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 DPEP1P16444 411 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 MICAL1Q8TDZ2 1067 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 DCAF4Q8WV16 495 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 CEP63Q96MT8 703 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 PARK7Q99497 189 aaKnown RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 MTRF1LQ9UGC7 380 aaKnown RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 FEM1BQ9UK73 627 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 TMEM191BP0C7N4 346 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 TGFB2P61812 414 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 STRIP1Q5VSL9 837 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 SPATA24Q86W54 205 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 RPGRIP1Q96KN7 1286 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 LBHD1Q9BQE6 289 aaPredicted RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 HERC5Q9UII4 1024 aaKnown RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 HUNKP57058 714 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 NAA25Q14CX7 972 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 GPBP1Q86WP2 473 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 A0A0D9SFI3 127 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 CDC25BP30305 580 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 KRT9P35527 623 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 CDK8P49336 464 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
NFRKB-201ENST00000446488 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 CSGALNACT2Q8N6G5 542 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
NFRKB-201ENST00000446488 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
NFRKB-201ENST00000446488 TBC1D8BQ0IIM8 1120 aa12.11□□□□□ -0.47
NFRKB-201ENST00000446488 LRMPQ12912 555 aa12.11□□□□□ -0.47
NFRKB-201ENST00000446488 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
NFRKB-201ENST00000446488 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
NFRKB-201ENST00000446488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
NFRKB-201ENST00000446488 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms