RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CYBAP13498 195 aa27.88■■■□□ 2.05
C9orf3-207ENST00000445181 FGD1P98174 961 aa27.88■■■□□ 2.05
C9orf3-207ENST00000445181 CDC37Q16543 378 aaPredicted RBP27.88■■■□□ 2.05
C9orf3-207ENST00000445181 MAML3Q96JK9 1138 aa27.88■■■□□ 2.05
C9orf3-207ENST00000445181 MYL10Q9BUA6 226 aa27.88■■■□□ 2.05
C9orf3-207ENST00000445181 SLC12A7Q9Y666 1083 aa27.88■■■□□ 2.05
C9orf3-207ENST00000445181 ZNFX1Q9P2E3 1918 aaKnown RBP27.88■■■□□ 2.05
C9orf3-207ENST00000445181 PALM3A6NDB9 673 aaPredicted RBP27.87■■■□□ 2.05
C9orf3-207ENST00000445181 MSCO60682 206 aa27.87■■■□□ 2.05
C9orf3-207ENST00000445181 EIF5BO60841 1220 aaKnown RBP27.87■■■□□ 2.05
C9orf3-207ENST00000445181 TAL1P17542 331 aaPredicted RBP27.87■■■□□ 2.05
C9orf3-207ENST00000445181 PSMA5P28066 241 aa27.87■■■□□ 2.05
C9orf3-207ENST00000445181 EXOSC10Q01780 885 aaKnown RBP27.87■■■□□ 2.05
C9orf3-207ENST00000445181 BLOC1S2Q6QNY1 142 aa27.87■■■□□ 2.05
C9orf3-207ENST00000445181 CTCFLQ8NI51 663 aaPredicted RBP27.87■■■□□ 2.05
C9orf3-207ENST00000445181 CHRDL2Q6WN34 429 aa27.86■■■□□ 2.05
C9orf3-207ENST00000445181 SYNE3Q6ZMZ3 975 aa27.86■■■□□ 2.05
C9orf3-207ENST00000445181 CEP290O15078 2479 aa27.86■■■□□ 2.05
C9orf3-207ENST00000445181 CALM1P0DP23 149 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 CALM2P0DP24 149 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 CALM3P0DP25 149 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 CPA1P15085 419 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 KIF5BP33176 963 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 USH1GQ495M9 461 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 MUM1L1Q5H9M0 696 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.85■■■□□ 2.05
C9orf3-207ENST00000445181 JMJD4Q9H9V9 463 aa27.85■■■□□ 2.05
C9orf3-207ENST00000445181 CASTP20810 708 aaKnown RBP27.84■■■□□ 2.05
C9orf3-207ENST00000445181 ZNF792Q3KQV3 632 aa27.84■■■□□ 2.05
C9orf3-207ENST00000445181 PRAMEF19Q5SWL8 479 aa27.84■■■□□ 2.05
C9orf3-207ENST00000445181 NSMFQ6X4W1 530 aa27.84■■■□□ 2.05
C9orf3-207ENST00000445181 MAP3K14Q99558 947 aa27.84■■■□□ 2.05
C9orf3-207ENST00000445181 A1CFQ9NQ94 594 aaKnown RBP27.84■■■□□ 2.05
C9orf3-207ENST00000445181 DIS3Q9Y2L1 958 aaKnown RBP27.84■■■□□ 2.05
C9orf3-207ENST00000445181 PFASO15067 1338 aa27.84■■■□□ 2.05
C9orf3-207ENST00000445181 COL6A1P12109 1028 aa27.83■■■□□ 2.05
C9orf3-207ENST00000445181 QRICH1Q2TAL8 776 aa27.83■■■□□ 2.05
C9orf3-207ENST00000445181 SGMS1Q86VZ5 419 aa27.83■■■□□ 2.05
C9orf3-207ENST00000445181 RAB11FIP4Q86YS3 637 aa27.83■■■□□ 2.05
C9orf3-207ENST00000445181 CCDC144CPQ8IYA2 1237 aa27.83■■■□□ 2.05
C9orf3-207ENST00000445181 C7orf61Q8IZ16 206 aa27.83■■■□□ 2.05
C9orf3-207ENST00000445181 POTEB2H3BUK9 544 aa27.82■■■□□ 2.04
C9orf3-207ENST00000445181 RXRAP19793 462 aa27.82■■■□□ 2.04
C9orf3-207ENST00000445181 MICU3Q86XE3 530 aa27.82■■■□□ 2.04
C9orf3-207ENST00000445181 FBXO11Q86XK2 927 aa27.82■■■□□ 2.04
C9orf3-207ENST00000445181 HOMER1Q86YM7 354 aa27.82■■■□□ 2.04
C9orf3-207ENST00000445181 PLXNA1Q9UIW2 1896 aa27.82■■■□□ 2.04
C9orf3-207ENST00000445181 DNAJC25-GNG10A0A024R161 153 aa27.81■■■□□ 2.04
C9orf3-207ENST00000445181 SEPT4O43236 478 aa27.81■■■□□ 2.04
C9orf3-207ENST00000445181 ANO1Q5XXA6 986 aa27.81■■■□□ 2.04
C9orf3-207ENST00000445181 Q6ZUG5 572 aa27.81■■■□□ 2.04
C9orf3-207ENST00000445181 NAP1L2Q9ULW6 460 aaPredicted RBP27.81■■■□□ 2.04
C9orf3-207ENST00000445181 SMCHD1A6NHR9 2005 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 PTPDC1A2A3K4 754 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 NFIBO00712 420 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 ZBTB5O15062 677 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 RPS6KB1P23443 525 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 GNAQP50148 359 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 TINF2Q9BSI4 451 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 CYP39A1Q9NYL5 469 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 ABCB11O95342 1321 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 ALPK3Q96L96 1907 aa27.8■■■□□ 2.04
C9orf3-207ENST00000445181 PIGSQ96S52 555 aa27.79■■■□□ 2.04
C9orf3-207ENST00000445181 LZTS2Q9BRK4 669 aa27.79■■■□□ 2.04
C9orf3-207ENST00000445181 AMNQ9BXJ7 453 aa27.79■■■□□ 2.04
C9orf3-207ENST00000445181 RIOX1Q9H6W3 641 aa27.79■■■□□ 2.04
C9orf3-207ENST00000445181 RBM27Q9P2N5 1060 aaKnown RBP27.79■■■□□ 2.04
C9orf3-207ENST00000445181 MYH6P13533 1939 aa27.79■■■□□ 2.04
C9orf3-207ENST00000445181 FRMPD3Q5JV73 1810 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 KLF18A0A0U1RQI7 1052 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 ZBTB43O43298 467 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 CNTN2Q02246 1040 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 APOA5Q6Q788 366 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 FANCBQ8NB91 859 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 ARRDC4Q8NCT1 418 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 CLEC4DQ8WXI8 215 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 PIBF1Q8WXW3 757 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 NRBP1Q9UHY1 535 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 BRPF3Q9ULD4 1205 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 CYP46A1Q9Y6A2 500 aa27.78■■■□□ 2.04
C9orf3-207ENST00000445181 DNM1LO00429 736 aa27.77■■■□□ 2.04
C9orf3-207ENST00000445181 BAATQ14032 418 aaPredicted RBP27.77■■■□□ 2.04
C9orf3-207ENST00000445181 RNF207Q6ZRF8 634 aa27.77■■■□□ 2.04
C9orf3-207ENST00000445181 RUFY3Q7L099 469 aa27.77■■■□□ 2.04
C9orf3-207ENST00000445181 MSL3Q8N5Y2 521 aaKnown RBP27.77■■■□□ 2.04
C9orf3-207ENST00000445181 BRF1Q92994 677 aa27.77■■■□□ 2.04
C9orf3-207ENST00000445181 MTMR8Q96EF0 704 aa27.77■■■□□ 2.04
C9orf3-207ENST00000445181 SENP6Q9GZR1 1112 aaPredicted RBP27.77■■■□□ 2.04
C9orf3-207ENST00000445181 ZMYND8Q9ULU4 1186 aaPredicted RBP27.77■■■□□ 2.04
C9orf3-207ENST00000445181 MRPL11Q9Y3B7 192 aaKnown RBP27.77■■■□□ 2.04
C9orf3-207ENST00000445181 BAZ2BQ9UIF8 2168 aaKnown RBP27.77■■■□□ 2.04
C9orf3-207ENST00000445181 CYTH3O43739 400 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 PLEKHA8P1O95397 391 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 CALML3P27482 149 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 LRRC26Q2I0M4 334 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 SLC35G1Q2M3R5 365 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 GJC2Q5T442 439 aaPredicted RBP27.76■■■□□ 2.03
C9orf3-207ENST00000445181 ZNF467Q7Z7K2 595 aaPredicted RBP27.76■■■□□ 2.03
C9orf3-207ENST00000445181 FAM133AQ8N9E0 248 aa27.76■■■□□ 2.03
C9orf3-207ENST00000445181 SPZ1Q9BXG8 430 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms