RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PPP1R3GB7ZBB8 358 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 PPP1R11O60927 126 aaPredicted RBP15.44■□□□□ 0.06
RBM39-216ENST00000444878 STX17P56962 302 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 NAALADL2Q58DX5 795 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 SLFN13Q68D06 897 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 ARMCX5Q6P1M9 558 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 RSBN1LQ6PCB5 846 aaPredicted RBP15.44■□□□□ 0.06
RBM39-216ENST00000444878 VSTM4Q8IW00 320 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 LARGE2Q8N3Y3 721 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 DCAF4Q8WV16 495 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 CUL5Q93034 780 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 PSMD1Q99460 953 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 RIC8AQ9NPQ8 531 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 GDF11O95390 407 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 RPN1P04843 607 aaKnown RBP15.44■□□□□ 0.06
RBM39-216ENST00000444878 MRPL12P52815 198 aaKnown RBP15.44■□□□□ 0.06
RBM39-216ENST00000444878 TPD52L1Q16890 204 aaPredicted RBP15.44■□□□□ 0.06
RBM39-216ENST00000444878 CABP7Q86V35 215 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 MTMR8Q96EF0 704 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 PRIMPOLQ96LW4 560 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 CSRNP1Q96S65 589 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 PLIN2Q99541 437 aa15.44■□□□□ 0.06
RBM39-216ENST00000444878 UQCRHLA0A096LP55 91 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 TMEM232C9JQI7 657 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 RAD17O75943 681 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 UQCRHP07919 91 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 TECP42680 631 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 C16orf45Q96MC5 204 aaPredicted RBP15.43■□□□□ 0.06
RBM39-216ENST00000444878 ZNF277Q9NRM2 450 aaPredicted RBP15.43■□□□□ 0.06
RBM39-216ENST00000444878 HDAC9Q9UKV0 1011 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 MYL1P05976 194 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 DPEP1P16444 411 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 TNNI2P48788 182 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 CALCRLQ16602 461 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 RBM26Q5T8P6 1007 aaKnown RBP15.43■□□□□ 0.06
RBM39-216ENST00000444878 ZNF658Q5TYW1 1059 aaPredicted RBP15.43■□□□□ 0.06
RBM39-216ENST00000444878 PSTPIP2Q9H939 334 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 INTS13Q9NVM9 706 aa15.43■□□□□ 0.06
RBM39-216ENST00000444878 PSMD14O00487 310 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 TXKP42681 527 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 UBE2SQ16763 222 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 SIAH1Q8IUQ4 282 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 OGFOD1Q8N543 542 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 SLC16A10Q8TF71 515 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 CTNND2Q9UQB3 1225 aa15.42■□□□□ 0.06
RBM39-216ENST00000444878 COL2A1P02458 1487 aaPredicted RBP15.42■□□□□ 0.06
RBM39-216ENST00000444878 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 TCP10L2B9ZVM9 353 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 F5H6K3 240 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 VIL1P09327 827 aaKnown RBP15.41■□□□□ 0.06
RBM39-216ENST00000444878 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 PLCG1P19174 1290 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 KCNA3P22001 575 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 KLRC3Q07444 240 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 DLGAP5Q15398 846 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 QRICH1Q2TAL8 776 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 MAGEF1Q9HAY2 307 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 KBTBD4Q9NVX7 518 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 TDP2O95551 362 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 GH2P01242 217 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 CLK2P49760 499 aaKnown RBP15.41■□□□□ 0.06
RBM39-216ENST00000444878 PTPN21Q16825 1174 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 TMEM266Q2M3C6 531 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 IGSF22Q8N9C0 903 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 MTMR9Q96QG7 549 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 HERC5Q9UII4 1024 aaKnown RBP15.41■□□□□ 0.06
RBM39-216ENST00000444878 PCDHA1Q9Y5I3 950 aa15.41■□□□□ 0.06
RBM39-216ENST00000444878 CLRN2A0PK11 232 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 SLC37A4O43826 429 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 TNNT1P13805 278 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 PAK1Q13153 545 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
RBM39-216ENST00000444878 GMCL1P1Q8NEA9 526 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.4■□□□□ 0.06
RBM39-216ENST00000444878 RWDD2AQ9UIY3 292 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 KIF13BQ9NQT8 1826 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 USP27XA6NNY8 438 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 KCNB1Q14721 858 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 NR1I3Q14994 352 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 CDKAL1Q5VV42 579 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 SPECC1LQ69YQ0 1117 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 PPP4R3AQ6IN85 833 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 CCAR2Q8N163 923 aaKnown RBP15.4■□□□□ 0.06
RBM39-216ENST00000444878 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 MYRIPQ8NFW9 859 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 CTAGE1Q96RT6 745 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 GDAQ9Y2T3 454 aa15.4■□□□□ 0.06
RBM39-216ENST00000444878 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
RBM39-216ENST00000444878 EDIL3O43854 480 aa15.39■□□□□ 0.05
RBM39-216ENST00000444878 NDUFB10O96000 172 aa15.39■□□□□ 0.05
RBM39-216ENST00000444878 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.057e-33■■□□□ 11.8
RBM39-216ENST00000444878 IKQ13123 557 aaPredicted RBP15.39■□□□□ 0.05
RBM39-216ENST00000444878 NELFBQ8WX92 580 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms