RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GSDMDP57764 484 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 CDC37Q16543 378 aaPredicted RBP17.73■□□□□ 0.43
SNX13-204ENST00000444712 RRAGBQ5VZM2 374 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 SH2D4AQ9H788 454 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 PSTPIP2Q9H939 334 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 VEZTQ9HBM0 779 aa17.73■□□□□ 0.43
SNX13-204ENST00000444712 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
SNX13-204ENST00000444712 NDUFB10O96000 172 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 BMP3P12645 472 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 BMP6P22004 513 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 TMEM266Q2M3C6 531 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 QRICH1Q2TAL8 776 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 PPP4R3AQ6IN85 833 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 BTNL9Q6UXG8 535 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 ZBED3Q96IU2 234 aaPredicted RBP17.72■□□□□ 0.43
SNX13-204ENST00000444712 GOPCQ9HD26 462 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 ATAD5Q96QE3 1844 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 PPP1R11O60927 126 aaPredicted RBP17.72■□□□□ 0.43
SNX13-204ENST00000444712 PTGS1P23219 599 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
SNX13-204ENST00000444712 FANCCQ00597 558 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 AMNQ9BXJ7 453 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 TMEM260Q9NX78 707 aa17.72■□□□□ 0.43
SNX13-204ENST00000444712 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
SNX13-204ENST00000444712 CALCRLQ16602 461 aa17.71■□□□□ 0.43
SNX13-204ENST00000444712 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
SNX13-204ENST00000444712 ZNF830Q96NB3 372 aaPredicted RBP17.71■□□□□ 0.43
SNX13-204ENST00000444712 IFNKQ9P0W0 207 aa17.71■□□□□ 0.43
SNX13-204ENST00000444712 AP3B2Q13367 1082 aa17.71■□□□□ 0.42
SNX13-204ENST00000444712 GTPBP4Q9BZE4 634 aaKnown RBP17.71■□□□□ 0.42
SNX13-204ENST00000444712 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.42
SNX13-204ENST00000444712 KCNF1Q9H3M0 494 aa17.71■□□□□ 0.42
SNX13-204ENST00000444712 MYOZ2Q9NPC6 264 aa17.71■□□□□ 0.42
SNX13-204ENST00000444712 PCDHA1Q9Y5I3 950 aa17.71■□□□□ 0.42
SNX13-204ENST00000444712 OFD1O75665 1012 aa17.7■□□□□ 0.42
SNX13-204ENST00000444712 SERPINC1P01008 464 aa17.7■□□□□ 0.42
SNX13-204ENST00000444712 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX13-204ENST00000444712 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
SNX13-204ENST00000444712 KARSQ15046 597 aaKnown RBP17.7■□□□□ 0.42
SNX13-204ENST00000444712 SHROOM1Q2M3G4 852 aaPredicted RBP17.7■□□□□ 0.42
SNX13-204ENST00000444712 CABP7Q86V35 215 aa17.7■□□□□ 0.42
SNX13-204ENST00000444712 ZBTB21Q9ULJ3 1066 aa17.7■□□□□ 0.42
SNX13-204ENST00000444712 TMX2Q9Y320 296 aa17.7■□□□□ 0.42
SNX13-204ENST00000444712 FBXO11Q86XK2 927 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 IGSF22Q8N9C0 903 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 CALML4Q96GE6 196 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 MTMR9Q96QG7 549 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 HSD3B7Q9H2F3 369 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 NFKBIEO00221 500 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 WNT10BO00744 389 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 UBASH3AP57075 661 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 ZNF280AP59817 542 aaPredicted RBP17.69■□□□□ 0.42
SNX13-204ENST00000444712 PDIA5Q14554 519 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
SNX13-204ENST00000444712 CCDC47Q96A33 483 aaKnown RBP17.69■□□□□ 0.42
SNX13-204ENST00000444712 USP11P51784 963 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 STAT2P52630 851 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 AMPD3Q01432 767 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 MAP3K10Q02779 954 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 UBE2SQ16763 222 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 MOXD1Q6UVY6 613 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 KIAA1524Q8TCG1 905 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 GINM1Q9NU53 330 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 FANCLQ9NW38 375 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 NRBP1Q9UHY1 535 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 NFE2L3Q9Y4A8 694 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 SYNRGQ9UMZ2 1314 aa17.68■□□□□ 0.42
SNX13-204ENST00000444712 NRDCO43847 1150 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 FOSP01100 380 aaPredicted RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 RPN1P04843 607 aaKnown RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 RRP1BQ14684 758 aaKnown RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 KCNB1Q14721 858 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNX13-204ENST00000444712 ZNF658Q5TYW1 1059 aaPredicted RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 SPTLC3Q9NUV7 552 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 KBTBD4Q9NVX7 518 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 PPP1R1BQ9UD71 204 aaPredicted RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 PLA2G6O60733 806 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 ASNSP08243 561 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 CAP2P40123 477 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 TECP42680 631 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 JAG1P78504 1218 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 SPATA1Q5VX52 437 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 LRRC8AQ8IWT6 810 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 CHURC1Q8WUH1 139 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 DPF2Q92785 391 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 STK17AQ9UEE5 414 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 DDX25Q9UHL0 483 aaKnown RBP17.67■□□□□ 0.42
SNX13-204ENST00000444712 BCS1LQ9Y276 419 aa17.67■□□□□ 0.42
SNX13-204ENST00000444712 A0A1W2PRG0 241 aa17.66■□□□□ 0.42
SNX13-204ENST00000444712 SLC26A4O43511 780 aa17.66■□□□□ 0.42
SNX13-204ENST00000444712 CDC25AP30304 524 aa17.66■□□□□ 0.42
SNX13-204ENST00000444712 TXKP42681 527 aa17.66■□□□□ 0.42
SNX13-204ENST00000444712 CUL4BQ13620 913 aa17.66■□□□□ 0.42
SNX13-204ENST00000444712 NAALADL2Q58DX5 795 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms