RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ARID5AQ03989 594 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 PBKQ96KB5 322 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 FAM167BQ9BTA0 163 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 EYA2O00167 538 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 DRD4P21917 467 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 TNFRSF8P28908 595 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 CASP1P29466 404 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GRIK3Q13003 919 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 DYNC1I2Q13409 638 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 PBRM1Q86U86 1689 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 A1BGP04217 495 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 CD44P16070 742 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 LRRC23Q53EV4 343 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 CREG2Q8IUH2 290 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 PLIN2Q99541 437 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 DDX21Q9NR30 783 aaKnown RBP eCLIP5.53□□□□□ -1.52
HERC1-201ENST00000443617 RNMTO43148 476 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 WTAPQ15007 396 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 AGBL2Q5U5Z8 902 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 C1orf131Q8NDD1 294 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 NUDCD1Q96RS6 583 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 KLHL33A6NCF5 533 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GPAA1O43292 621 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 SKAP2O75563 359 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 PALMO75781 387 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 ATP2A2P16615 1042 aaKnown RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 CDK17Q00537 523 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GPIHBP1Q8IV16 184 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 B4GALNT2Q8NHY0 566 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GRIN2DO15399 1336 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GLI1P08151 1106 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GDF3Q9NR23 364 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 GHRP10912 638 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 FERP16591 822 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 ITGB3BPQ13352 177 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 IQCKQ8N0W5 287 aa5.53□□□□□ -1.52
HERC1-201ENST00000443617 ZNF330Q9Y3S2 320 aaPredicted RBP5.53□□□□□ -1.52
HERC1-201ENST00000443617 NQO1P15559 274 aaKnown RBP5.52□□□□□ -1.52
HERC1-201ENST00000443617 LAMB3Q13751 1172 aa5.52□□□□□ -1.52
HERC1-201ENST00000443617 OXER1Q8TDS5 423 aa5.52□□□□□ -1.52
HERC1-201ENST00000443617 KCNK9Q9NPC2 374 aa5.52□□□□□ -1.52
HERC1-201ENST00000443617 NLRP2Q9NX02 1062 aa5.52□□□□□ -1.52
HERC1-201ENST00000443617 IQGAP3Q86VI3 1631 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ATP6V1G2O95670 118 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 CARSP49589 748 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 HERVK_113P62684 666 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 SEMA3FQ13275 785 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 KIF2BQ8N4N8 673 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 APPBP2Q92624 585 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ELAC2Q9BQ52 826 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 TUBGCP2Q9BSJ2 902 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 KLHL14Q9P2G3 628 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 GSTA1P08263 222 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ADORA1P30542 326 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 AMPD3Q01432 767 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 USP49Q70CQ1 688 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 RAB17Q9H0T7 212 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 SEC31BQ9NQW1 1179 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 KRT14P02533 472 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 GNAT1P11488 350 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 NLRP5P59047 1200 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 PPP2R5EQ16537 467 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 MMP1P03956 469 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 SNRPA1P09661 255 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 RPS6KA3P51812 740 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 IFIT5Q13325 482 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 XRCC4Q13426 336 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 KIAA0753Q2KHM9 967 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 TRPM8Q7Z2W7 1104 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ZIM3Q96PE6 472 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 PAPOLBQ9NRJ5 636 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 FBXL5Q9UKA1 691 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ABL1P00519 1130 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 CHGBP05060 677 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 MMEP08473 750 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ANTXR2P58335 489 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 SLC39A2Q9NP94 309 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 TRPC6Q9Y210 931 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 DNM1LO00429 736 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 TOB1P50616 345 aaPredicted RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 CCDC6Q16204 474 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 CROCCP2Q86T23 111 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.52□□□□□ -1.533e-6■■■■■ 50.8
HERC1-201ENST00000443617 ITFG2Q969R8 447 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 SAMD9LQ8IVG5 1584 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 RTN3O95197 1032 aaPredicted RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 FTCDO95954 541 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 SRGNP10124 158 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 PRLRP16471 622 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ITIH4Q14624 930 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 APOA5Q6Q788 366 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 GBP7Q8N8V2 638 aaPredicted RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 MGARPQ8TDB4 240 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 FGD4Q96M96 766 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 PANK4Q9NVE7 773 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 FLT4P35916 1363 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 WDR17Q8IZU2 1322 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 AGPAT5Q9NUQ2 364 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms