RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 COLQQ9Y215 455 aaPredicted RBP25.87■■□□□ 1.73
HDLBP-220ENST00000442730 MCM3APO60318 1980 aa25.86■■□□□ 1.73
HDLBP-220ENST00000442730 MYCNP04198 464 aaPredicted RBP25.86■■□□□ 1.73
HDLBP-220ENST00000442730 ANTXR2P58335 489 aa25.86■■□□□ 1.73
HDLBP-220ENST00000442730 CDC37Q16543 378 aaPredicted RBP25.86■■□□□ 1.73
HDLBP-220ENST00000442730 CHRDL2Q6WN34 429 aa25.86■■□□□ 1.73
HDLBP-220ENST00000442730 MB21D2Q8IYB1 491 aaPredicted RBP25.86■■□□□ 1.73
HDLBP-220ENST00000442730 DNAH12Q6ZR08 3092 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 IFIT3O14879 490 aaKnown RBP25.85■■□□□ 1.73
HDLBP-220ENST00000442730 PGK1P00558 417 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 HABP4Q5JVS0 413 aaKnown RBP25.85■■□□□ 1.73
HDLBP-220ENST00000442730 ADGRF4Q8IZF3 695 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 PURBQ96QR8 312 aaKnown RBP25.85■■□□□ 1.73
HDLBP-220ENST00000442730 SENP2Q9HC62 589 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 ANO2Q9NQ90 1003 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 FAM184BQ9ULE4 1060 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 SYNRGQ9UMZ2 1314 aa25.85■■□□□ 1.73
HDLBP-220ENST00000442730 ASB14A6NK59 587 aa25.84■■□□□ 1.73
HDLBP-220ENST00000442730 ADCY6O43306 1168 aa25.84■■□□□ 1.73
HDLBP-220ENST00000442730 ADAMTS4O75173 837 aa25.84■■□□□ 1.73
HDLBP-220ENST00000442730 BAATQ14032 418 aaPredicted RBP25.84■■□□□ 1.73
HDLBP-220ENST00000442730 SLC30A10Q6XR72 485 aa25.84■■□□□ 1.73
HDLBP-220ENST00000442730 CHST3Q7LGC8 479 aa25.84■■□□□ 1.73
HDLBP-220ENST00000442730 STAG2Q8N3U4 1231 aa25.84■■□□□ 1.73
HDLBP-220ENST00000442730 DDX49Q9Y6V7 483 aaKnown RBP25.84■■□□□ 1.73
HDLBP-220ENST00000442730 ERICH2A1L162 156 aa25.83■■□□□ 1.73
HDLBP-220ENST00000442730 SLC27A2O14975 620 aa25.83■■□□□ 1.73
HDLBP-220ENST00000442730 SART3Q15020 963 aaKnown RBP25.83■■□□□ 1.73
HDLBP-220ENST00000442730 CCDC144BQ3MJ40 725 aa25.83■■□□□ 1.73
HDLBP-220ENST00000442730 USH1GQ495M9 461 aa25.83■■□□□ 1.73
HDLBP-220ENST00000442730 MAD2L2Q9UI95 211 aa25.83■■□□□ 1.73
HDLBP-220ENST00000442730 ZMYND8Q9ULU4 1186 aaPredicted RBP25.83■■□□□ 1.73
HDLBP-220ENST00000442730 PHF24Q9UPV7 400 aa25.83■■□□□ 1.73
HDLBP-220ENST00000442730 TRIOBPQ9H2D6 2365 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 PTPDC1A2A3K4 754 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 CDC45O75419 566 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 ADCYAP1R1P41586 468 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 ATN1P54259 1190 aaPredicted RBP25.82■■□□□ 1.72
HDLBP-220ENST00000442730 WTAPQ15007 396 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 TMEM67Q5HYA8 995 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 RNF180Q86T96 592 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 PRO3102Q9H379 93 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 JMJD4Q9H9V9 463 aa25.82■■□□□ 1.72
HDLBP-220ENST00000442730 DHX16O60231 1041 aaKnown RBP25.81■■□□□ 1.72
HDLBP-220ENST00000442730 DUSP11O75319 330 aaKnown RBP25.81■■□□□ 1.72
HDLBP-220ENST00000442730 GRM4Q14833 912 aa25.81■■□□□ 1.72
HDLBP-220ENST00000442730 NECTIN1Q15223 517 aa25.81■■□□□ 1.72
HDLBP-220ENST00000442730 QRICH1Q2TAL8 776 aa25.81■■□□□ 1.72
HDLBP-220ENST00000442730 CREB3L3Q68CJ9 461 aa25.81■■□□□ 1.72
HDLBP-220ENST00000442730 RNF207Q6ZRF8 634 aa25.81■■□□□ 1.72
HDLBP-220ENST00000442730 MORC4Q8TE76 937 aa25.81■■□□□ 1.72
HDLBP-220ENST00000442730 PALM3A6NDB9 673 aaPredicted RBP25.8■■□□□ 1.72
HDLBP-220ENST00000442730 KLRF2D3W0D1 207 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 CALML3P27482 149 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 TROAPQ12815 778 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 COL9A3Q14050 684 aaPredicted RBP25.8■■□□□ 1.72
HDLBP-220ENST00000442730 ERICH6BQ5W0A0 696 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 CASC1Q6TDU7 716 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 IGDCC4Q8TDY8 1250 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 ADD3Q9UEY8 706 aaKnown RBP25.8■■□□□ 1.72
HDLBP-220ENST00000442730 ABCB11O95342 1321 aa25.8■■□□□ 1.72
HDLBP-220ENST00000442730 SYN1P17600 705 aa25.79■■□□□ 1.72
HDLBP-220ENST00000442730 ALDH5A1P51649 535 aaPredicted RBP25.79■■□□□ 1.72
HDLBP-220ENST00000442730 RTP1P59025 263 aa25.79■■□□□ 1.72
HDLBP-220ENST00000442730 RPS6P62753 249 aaKnown RBP25.79■■□□□ 1.72
HDLBP-220ENST00000442730 SNX17Q15036 470 aa25.79■■□□□ 1.72
HDLBP-220ENST00000442730 FERMT2Q96AC1 680 aa25.79■■□□□ 1.72
HDLBP-220ENST00000442730 UPF3AQ9H1J1 476 aaKnown RBP25.79■■□□□ 1.72
HDLBP-220ENST00000442730 RBM27Q9P2N5 1060 aaKnown RBP25.79■■□□□ 1.72
HDLBP-220ENST00000442730 MYADML2A6NDP7 307 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 PRC1O43663 620 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 SLC35G1Q2M3R5 365 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 SLC39A5Q6ZMH5 540 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 FBXO16Q8IX29 292 aaPredicted RBP25.78■■□□□ 1.72
HDLBP-220ENST00000442730 RGS22Q8NE09 1264 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 KLHDC9Q8NEP7 349 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 MTMR8Q96EF0 704 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 LY9Q9HBG7 655 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 VAT1LQ9HCJ6 419 aa25.78■■□□□ 1.72
HDLBP-220ENST00000442730 GPHNQ9NQX3 736 aaPredicted RBP25.78■■□□□ 1.72
HDLBP-220ENST00000442730 LOC102724159A0A0B4J2E5 919 aa25.77■■□□□ 1.72
HDLBP-220ENST00000442730 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.77■■□□□ 1.72
HDLBP-220ENST00000442730 CST5P28325 142 aaPredicted RBP25.77■■□□□ 1.72
HDLBP-220ENST00000442730 PWP2Q15269 919 aaKnown RBP25.77■■□□□ 1.72
HDLBP-220ENST00000442730 CCSAPQ6IQ19 270 aaPredicted RBP25.77■■□□□ 1.72
HDLBP-220ENST00000442730 FBXO11Q86XK2 927 aa25.77■■□□□ 1.72
HDLBP-220ENST00000442730 TSEN34Q9BSV6 310 aaKnown RBP25.77■■□□□ 1.72
HDLBP-220ENST00000442730 MTA3Q9BTC8 594 aa25.77■■□□□ 1.72
HDLBP-220ENST00000442730 VTA1Q9NP79 307 aa25.77■■□□□ 1.72
HDLBP-220ENST00000442730 A0A1W2PQ45 241 aaPredicted RBP25.76■■□□□ 1.71
HDLBP-220ENST00000442730 A0A1W2PQY0 241 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 MCM5P33992 734 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 GJA9P57773 515 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 IRX5P78411 483 aaPredicted RBP25.76■■□□□ 1.71
HDLBP-220ENST00000442730 TAPT1Q6NXT6 567 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 EEPD1Q7L9B9 569 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 CATIPQ7Z7H3 387 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 MAF1Q9H063 256 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 PCDH10Q9P2E7 1040 aa25.76■■□□□ 1.71
HDLBP-220ENST00000442730 SH2B2O14492 632 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms