RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RUFY3Q7L099 469 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 A1CFQ9NQ94 594 aaKnown RBP17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 PAK6Q9NQU5 681 aaPredicted RBP17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 NRBP1Q9UHY1 535 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 FRMPD3Q5JV73 1810 aa17.48■□□□□ 0.39
CSNK1E-210ENST00000442216 ABCB11O95342 1321 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 ZBTB5O15062 677 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 FGD1P98174 961 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 CACNB2Q08289 660 aaPredicted RBP17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 TRIM32Q13049 653 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 MAMDC4Q6UXC1 1216 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 FBXO11Q86XK2 927 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 FANCBQ8NB91 859 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 IL17RAQ96F46 866 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 TCEANC2Q96MN5 208 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 MYL10Q9BUA6 226 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 AMNQ9BXJ7 453 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 UNC93B1Q9H1C4 597 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 VAT1LQ9HCJ6 419 aa17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
CSNK1E-210ENST00000442216 CYTH3O43739 400 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 GJA8P48165 433 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 SOX10P56693 466 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 C8orf34Q49A92 452 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 Q6ZUG5 572 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 CLEC4DQ8WXI8 215 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 TINF2Q9BSI4 451 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.46■□□□□ 0.394e-8■■□□□ 12.3
CSNK1E-210ENST00000442216 CYP39A1Q9NYL5 469 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 MRPL11Q9Y3B7 192 aaKnown RBP17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 CYP46A1Q9Y6A2 500 aa17.46■□□□□ 0.39
CSNK1E-210ENST00000442216 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.38
CSNK1E-210ENST00000442216 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 ZBTB43O43298 467 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 CYBAP13498 195 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 CPA1P15085 419 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 SLC35G1Q2M3R5 365 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 SAMD3Q8N6K7 520 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 BRPF3Q9ULD4 1205 aa17.45■□□□□ 0.38
CSNK1E-210ENST00000442216 KLF18A0A0U1RQI7 1052 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 NFIBO00712 420 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 SGPL1O95470 568 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 CYP2C19P33261 490 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 EVCP57679 992 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 USH1GQ495M9 461 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 NSMFQ6X4W1 530 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 MCF2L2Q86YR7 1114 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 BRF1Q92994 677 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 PIGSQ96S52 555 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 GTF3C3Q9Y5Q9 886 aa17.44■□□□□ 0.38
CSNK1E-210ENST00000442216 NID2Q14112 1375 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 ASB14A6NK59 587 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 MSCO60682 206 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 SEC24BO95487 1268 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 RXRAP19793 462 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 BAATQ14032 418 aaPredicted RBP17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 RTN1Q16799 776 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 RNF207Q6ZRF8 634 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 TMTC3Q6ZXV5 915 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 U2AF1L4Q8WU68 220 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 RRP36Q96EU6 259 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 FGD4Q96M96 766 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 CRISPLD2Q9H0B8 497 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 MAP3K20Q9NYL2 800 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 ADD3Q9UEY8 706 aaKnown RBP17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 PCDHA1Q9Y5I3 950 aa17.43■□□□□ 0.38
CSNK1E-210ENST00000442216 CCDC196A0A1B0GTZ2 297 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 PTPDC1A2A3K4 754 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 TAL1P17542 331 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 CNTN2Q02246 1040 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 GHRHRQ02643 423 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 APOBRQ0VD83 1088 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 DEFB118Q96PH6 123 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 ALDH8A1Q9H2A2 487 aaPredicted RBP17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 CNPY2Q9Y2B0 182 aa17.42■□□□□ 0.38
CSNK1E-210ENST00000442216 CENPFP49454 3210 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 GOLGA8AA7E2F4 631 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 GOLGA8BA8MQT2 603 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 SEPT4O43236 478 aa17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 PPP1R11O60927 126 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 EN2P19622 333 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-210ENST00000442216 TOB2Q14106 344 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms