RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 KAT14Q9H8E8 782 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
PTPRN-206ENST00000442029 B4E1Z4 1266 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 PDE4AP27815 886 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 ACLYP53396 1101 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 GPATCH4Q5T3I0 446 aaKnown RBP16.95■□□□□ 0.3
PTPRN-206ENST00000442029 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 KRT23Q9C075 422 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 ADD3Q9UEY8 706 aaKnown RBP16.95■□□□□ 0.3
PTPRN-206ENST00000442029 RAD50Q92878 1312 aa16.95■□□□□ 0.3
PTPRN-206ENST00000442029 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 SOWAHBA6NEL2 793 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 PQBP1O60828 265 aaKnown RBP16.94■□□□□ 0.3
PTPRN-206ENST00000442029 TNFAIP2Q03169 654 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 TLE2Q04725 743 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 KCNA10Q16322 511 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 LRIT3Q3SXY7 679 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 KLHDC9Q8NEP7 349 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 PDLIM7Q9NR12 457 aa16.94■□□□□ 0.3
PTPRN-206ENST00000442029 CLTBP09497 229 aa16.93■□□□□ 0.3
PTPRN-206ENST00000442029 SNHG28P0DPA3 235 aa16.93■□□□□ 0.3
PTPRN-206ENST00000442029 GSPT1P15170 499 aaKnown RBP16.93■□□□□ 0.3
PTPRN-206ENST00000442029 CST5P28325 142 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-206ENST00000442029 GJA9P57773 515 aa16.93■□□□□ 0.3
PTPRN-206ENST00000442029 GNASQ5JWF2 1037 aa16.93■□□□□ 0.3
PTPRN-206ENST00000442029 ZSCAN10Q96SZ4 725 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-206ENST00000442029 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
PTPRN-206ENST00000442029 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
PTPRN-206ENST00000442029 SZT2Q5T011 3432 aa16.93■□□□□ 0.3
PTPRN-206ENST00000442029 KIAA1217Q5T5P2 1943 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 MYADML2A6NDP7 307 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 DCDC2CA8MYV0 355 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 ASGR1P07306 291 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 GOLGA8HP0CJ92 632 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 TRDNQ13061 729 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 BAATQ14032 418 aaPredicted RBP16.92■□□□□ 0.3
PTPRN-206ENST00000442029 RNF207Q6ZRF8 634 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 EEPD1Q7L9B9 569 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 KATNBL1Q9H079 304 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 AP5M1Q9H0R1 490 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 UPF3AQ9H1J1 476 aaKnown RBP16.92■□□□□ 0.3
PTPRN-206ENST00000442029 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 TNKSO95271 1327 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 MROH7Q68CQ1 1323 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 WDR19Q8NEZ3 1342 aa16.92■□□□□ 0.3
PTPRN-206ENST00000442029 NFIBO00712 420 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 ADCY6O43306 1168 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 DHX16O60231 1041 aaKnown RBP16.91■□□□□ 0.3
PTPRN-206ENST00000442029 RAG1P15918 1043 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 CALML3P27482 149 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 ALDH5A1P51649 535 aaPredicted RBP16.91■□□□□ 0.3
PTPRN-206ENST00000442029 GPR153Q6NV75 609 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 SH3RF1Q7Z6J0 888 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 FBXO16Q8IX29 292 aaPredicted RBP16.91■□□□□ 0.3
PTPRN-206ENST00000442029 BADQ92934 168 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 TMEM39AQ9NV64 488 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 ELP1O95163 1332 aa16.91■□□□□ 0.3
PTPRN-206ENST00000442029 BAZ2BQ9UIF8 2168 aaKnown RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 ZEB2O60315 1214 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 USH1GQ495M9 461 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 IQSEC1Q6DN90 963 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 TRIM43Q96BQ3 446 aaPredicted RBP16.9■□□□□ 0.3
PTPRN-206ENST00000442029 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
PTPRN-206ENST00000442029 LAMA3Q16787 3333 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 B4DLN1 442 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 CHMLP26374 656 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 MRPL12P52815 198 aaKnown RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 IRX5P78411 483 aaPredicted RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 BEX3Q00994 111 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 SLC30A10Q6XR72 485 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 TOX2Q96NM4 488 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 IL25Q9H293 177 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 CPVLQ9H3G5 476 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 DDX49Q9Y6V7 483 aaKnown RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
PTPRN-206ENST00000442029 ASTN1O14525 1302 aa16.89■□□□□ 0.29
PTPRN-206ENST00000442029 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
PTPRN-206ENST00000442029 TLR3O15455 904 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms