RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 PIGSQ96S52 555 aa17.51■□□□□ 0.39
TRAPPC12-210ENST00000441983 RNF146Q9NTX7 359 aa17.51■□□□□ 0.39
TRAPPC12-210ENST00000441983 MAP3K20Q9NYL2 800 aaKnown RBP17.51■□□□□ 0.39
TRAPPC12-210ENST00000441983 MRPL11Q9Y3B7 192 aaKnown RBP17.51■□□□□ 0.39
TRAPPC12-210ENST00000441983 PRPF3O43395 683 aaKnown RBP17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 GHRHRQ02643 423 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 SCRN1Q12765 414 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 IRF5Q13568 498 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 KCTD2Q14681 263 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 ME3Q16798 604 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 MORN1Q5T089 497 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 HOMER1Q86YM7 354 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 TRERF1Q96PN7 1200 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 NUDT12Q9BQG2 462 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 VAT1LQ9HCJ6 419 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 SRRDQ9UH36 339 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 CENPFP49454 3210 aa17.5■□□□□ 0.39
TRAPPC12-210ENST00000441983 HOXC6P09630 235 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 XRCC5P13010 732 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 ALAS1P13196 640 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 CTGFP29279 349 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 RGS2P41220 211 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 OTOP1Q7RTM1 612 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 MCF2L2Q86YR7 1114 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 MMP19Q99542 508 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 ARHGAP39Q9C0H5 1083 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 LCTP09848 1927 aa17.49■□□□□ 0.39
TRAPPC12-210ENST00000441983 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 PEX10O60683 326 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 DEXIO95424 95 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 PFKFB3Q16875 520 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 WDR78Q5VTH9 848 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 CCDC12Q8WUD4 166 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 USP6NLQ92738 828 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 APBA2Q99767 749 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 GLT8D2Q9H1C3 349 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 DIS3Q9Y2L1 958 aaKnown RBP17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 TRIM17Q9Y577 477 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 PCDHA1Q9Y5I3 950 aa17.48■□□□□ 0.39
TRAPPC12-210ENST00000441983 PPP1R11O60927 126 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 SNAP25P60880 206 aa17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 MAP2K5Q13163 448 aa17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 STK3Q13188 491 aa17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 USH1GQ495M9 461 aa17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 ANKRD35Q8N283 1001 aa17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 GJD2Q9UKL4 321 aa17.47■□□□□ 0.39
TRAPPC12-210ENST00000441983 DNAJC25-GNG10A0A024R161 153 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 LARGE1O95461 756 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 SCG2P13521 617 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 ADORA2AP29274 412 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 PRKCZQ05513 592 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 SSRP1Q08945 709 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 PXYLP1Q8TE99 480 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 CLEC4DQ8WXI8 215 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 WASF1Q92558 559 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 SNX21Q969T3 373 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 LARP6Q9BRS8 491 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 HOMER2Q9NSB8 354 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 BARHL2Q9NY43 387 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 PTPN22Q9Y2R2 807 aa17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 V9GY48 417 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC12-210ENST00000441983 ESYT2A0FGR8 921 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 FLT3LGP49771 235 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 CAP1Q01518 475 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 FBXO46Q6PJ61 603 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 NOL8Q76FK4 1167 aaKnown RBP17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 ZNF467Q7Z7K2 595 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 SLAIN1Q8ND83 568 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 CCDC148Q8NFR7 591 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 SLC26A6Q9BXS9 759 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
TRAPPC12-210ENST00000441983 LRRC37A2A6NM11 1700 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 PIK3CDO00329 1044 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 NFIBO00712 420 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 HSD17B4P51659 736 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 HMGN5P82970 282 aaKnown RBP17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 MUM1L1Q5H9M0 696 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 OLFML2BQ68BL8 750 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 RNF207Q6ZRF8 634 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 PHKBQ93100 1093 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 DDX11Q96FC9 970 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
TRAPPC12-210ENST00000441983 XBP1P17861 261 aa17.43■□□□□ 0.38
TRAPPC12-210ENST00000441983 SLC4A3P48751 1232 aa17.43■□□□□ 0.38
TRAPPC12-210ENST00000441983 PKN1Q16512 942 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms