RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 RAET1EQ8TD07 263 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 CHURC1Q8WUH1 139 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 SYMPKQ92797 1274 aaKnown RBP9.63□□□□□ -0.87
TIMP1-203ENST00000441738 MAML3Q96JK9 1138 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 TMEM87BQ96K49 555 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 JAKMIP1Q96N16 626 aaKnown RBP9.63□□□□□ -0.87
TIMP1-203ENST00000441738 KIF2CQ99661 725 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 RIOX1Q9H6W3 641 aa9.63□□□□□ -0.87
TIMP1-203ENST00000441738 A1CFQ9NQ94 594 aaKnown RBP9.63□□□□□ -0.87
TIMP1-203ENST00000441738 PAK6Q9NQU5 681 aaPredicted RBP9.63□□□□□ -0.87
TIMP1-203ENST00000441738 SPTBN5Q9NRC6 3674 aaKnown RBP9.63□□□□□ -0.87
TIMP1-203ENST00000441738 SOWAHBA6NEL2 793 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 KLRF2D3W0D1 207 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 ADCY6O43306 1168 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 SLC25A27O95847 323 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 HMGCRP04035 888 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 PARP1P09874 1014 aaKnown RBP9.62□□□□□ -0.87
TIMP1-203ENST00000441738 CYBAP13498 195 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 CCL5P13501 91 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 RGS2P41220 211 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 GJA8P48165 433 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 CNTN2Q02246 1040 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 CACNB2Q08289 660 aaPredicted RBP9.62□□□□□ -0.87
TIMP1-203ENST00000441738 CDC37Q16543 378 aaPredicted RBP9.62□□□□□ -0.87
TIMP1-203ENST00000441738 QRICH1Q2TAL8 776 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 WDR78Q5VTH9 848 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 SLC30A10Q6XR72 485 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
TIMP1-203ENST00000441738 FBXL16Q8N461 479 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 SRBD1Q8N5C6 995 aaKnown RBP9.62□□□□□ -0.87
TIMP1-203ENST00000441738 FAM133AQ8N9E0 248 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 TBC1D5Q92609 795 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 GDF15Q99988 308 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 KATNBL1Q9H079 304 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 ZSWIM6Q9HCJ5 1215 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 HOMER2Q9NSB8 354 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 RNF146Q9NTX7 359 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 COL20A1Q9P218 1284 aa9.62□□□□□ -0.87
TIMP1-203ENST00000441738 LTBP2Q14767 1821 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CNTNAP5Q8WYK1 1306 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 STRNO43815 780 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 ZBED4O75132 1171 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 DDAH1O94760 285 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 FDX1P10109 184 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 HOXD10P28358 340 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CDC27P30260 824 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CCND3P30281 292 aaPredicted RBP9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CYP2C19P33261 490 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 EVCP57679 992 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 GHRHRQ02643 423 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 OLFML2BQ68BL8 750 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CCDC144CPQ8IYA2 1237 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 PIGSQ96S52 555 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 MMP19Q99542 508 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 MAP3K14Q99558 947 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CYP39A1Q9NYL5 469 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 CCPG1Q9ULG6 757 aa9.61□□□□□ -0.87
TIMP1-203ENST00000441738 ISY1Q9ULR0 285 aaKnown RBP9.61□□□□□ -0.87
TIMP1-203ENST00000441738 FARP2O94887 1054 aaPredicted RBP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 SNAI1O95863 264 aaPredicted RBP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 GJB1P08034 283 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 FCER1AP12319 257 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 ALAS1P13196 640 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 PTGS1P23219 599 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 APOBRQ0VD83 1088 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 IKQ13123 557 aaPredicted RBP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 KRT32Q14532 448 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 LHX8Q68G74 356 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 Q6ZUG5 572 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 TMTC3Q6ZXV5 915 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 SPZ1Q9BXG8 430 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 TM6SF1Q9BZW5 370 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 CRISPLD2Q9H0B8 497 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.87
TIMP1-203ENST00000441738 ACAD9Q9H845 621 aa9.6□□□□□ -0.87
TIMP1-203ENST00000441738 TMEM265A0A087WTH1 108 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 KLF18A0A0U1RQI7 1052 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 hCG_1642624A0A1W2PR95 340 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 ADAMTS3O15072 1205 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 ZNF865P0CJ78 1059 aaPredicted RBP9.59□□□□□ -0.87
TIMP1-203ENST00000441738 COPB2P35606 906 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 SLC4A3P48751 1232 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 ST3GAL1Q11201 340 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 SART3Q15020 963 aaKnown RBP9.59□□□□□ -0.87
TIMP1-203ENST00000441738 NTRK3Q16288 839 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 TKFCQ3LXA3 575 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 USH1GQ495M9 461 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 PRAMEF19Q5SWL8 479 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 TMEM63BQ5T3F8 832 aa9.59□□□□□ -0.87
TIMP1-203ENST00000441738 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms