RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 IFIT3O14879 490 aaKnown RBP13.29□□□□□ -0.28
LTBR-203ENST00000441074 FSBPO95073 299 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 CCDC70Q6NSX1 233 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 GSPT2Q8IYD1 628 aaKnown RBP13.29□□□□□ -0.28
LTBR-203ENST00000441074 CAPZA3Q96KX2 299 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 VPS16Q9H269 839 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 CAPN7Q9Y6W3 813 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
LTBR-203ENST00000441074 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 OR8K1Q8NGG5 319 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 NAPBQ9H115 298 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 CTNND2Q9UQB3 1225 aa13.29□□□□□ -0.28
LTBR-203ENST00000441074 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
LTBR-203ENST00000441074 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 A0A087X0B3 334 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 ANO9A1A5B4 782 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 MBD4O95243 580 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 DEXIO95424 95 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 HERVK_113P62684 666 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 KRT83P78385 493 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 RTN1Q16799 776 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 SMYD4Q8IYR2 804 aaPredicted RBP13.28□□□□□ -0.28
LTBR-203ENST00000441074 TMTC2Q8N394 836 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 LCORLQ8N3X6 602 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 MMGT1Q8N4V1 131 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 CAGE1Q8TC20 777 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 ZNF384Q8TF68 577 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 RWDD2AQ9UIY3 292 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 SUFUQ9UMX1 484 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 KCNJ14Q9UNX9 436 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 DOCK2Q92608 1830 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 KIAA0754O94854 1291 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 GNAT2P19087 354 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 GUCY1A2P33402 732 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 TCP11X2Q5H9J9 407 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 AKNAD1Q5T1N1 836 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 SND1Q7KZF4 910 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■□□□□ 10
LTBR-203ENST00000441074 OTUD6BQ8N6M0 293 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 BANK1Q8NDB2 785 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 MYL10Q9BUA6 226 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
LTBR-203ENST00000441074 MYO5AQ9Y4I1 1855 aaKnown RBP13.28□□□□□ -0.28
LTBR-203ENST00000441074 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 PDE2AO00408 941 aaPredicted RBP13.27□□□□□ -0.28
LTBR-203ENST00000441074 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.28
LTBR-203ENST00000441074 KRT86O43790 486 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 MMP10P09238 476 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 CASP1P29466 404 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 MAP3K12Q12852 859 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 UBE4AQ14139 1066 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.28
LTBR-203ENST00000441074 DNAJC7Q99615 494 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 PAGR1Q9BTK6 254 aa13.27□□□□□ -0.28
LTBR-203ENST00000441074 KCNJ18B7U540 433 aa13.27□□□□□ -0.29
LTBR-203ENST00000441074 NDUFAB1O14561 156 aa13.27□□□□□ -0.29
LTBR-203ENST00000441074 KCNJ12Q14500 433 aa13.27□□□□□ -0.29
LTBR-203ENST00000441074 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
LTBR-203ENST00000441074 EPSTI1Q96J88 318 aa13.27□□□□□ -0.29
LTBR-203ENST00000441074 RABEP2Q9H5N1 569 aa13.27□□□□□ -0.29
LTBR-203ENST00000441074 GNL3LQ9NVN8 582 aaKnown RBP13.27□□□□□ -0.29
LTBR-203ENST00000441074 ZSWIM5Q9P217 1185 aa13.27□□□□□ -0.29
LTBR-203ENST00000441074 TNRC6CQ9HCJ0 1690 aaKnown RBP13.26□□□□□ -0.29
LTBR-203ENST00000441074 TTC26A0AVF1 554 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 ERICH2A1L162 156 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 H0YHG0 523 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 C21orf2O43822 256 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 PRDX5P30044 214 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 EVX2Q03828 476 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 UBXN1Q04323 297 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 ITIH3Q06033 890 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 NR5A1Q13285 461 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 GRAPQ13588 217 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 WTAPQ15007 396 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 PPP2R5BQ15173 497 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 TSR1Q2NL82 804 aaKnown RBP13.26□□□□□ -0.29
LTBR-203ENST00000441074 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 GRAPLQ8TC17 118 aaPredicted RBP13.26□□□□□ -0.29
LTBR-203ENST00000441074 SDR42E1Q8WUS8 393 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.29
LTBR-203ENST00000441074 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 EPB41L4AQ9HCS5 686 aaPredicted RBP13.26□□□□□ -0.29
LTBR-203ENST00000441074 LUC7L2Q9Y383 392 aaKnown RBP13.26□□□□□ -0.29
LTBR-203ENST00000441074 CASZ1Q86V15 1759 aa13.26□□□□□ -0.29
LTBR-203ENST00000441074 ZEB2O60315 1214 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 CYP7A1P22680 504 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 DYNLL1P63167 89 aaKnown RBP13.25□□□□□ -0.29
LTBR-203ENST00000441074 GPSM2P81274 684 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 SLC4A8Q2Y0W8 1093 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 RRAGBQ5VZM2 374 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 ZNF572Q7Z3I7 529 aaPredicted RBP13.25□□□□□ -0.29
LTBR-203ENST00000441074 KIAA1328Q86T90 577 aa13.25□□□□□ -0.29
LTBR-203ENST00000441074 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms