RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 BRF1Q92994 677 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 UPF3BQ9BZI7 483 aaKnown RBP23.49■■□□□ 1.35
TSSC4-206ENST00000440813 RIOX1Q9H6W3 641 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 CYP46A1Q9Y6A2 500 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 BAZ2BQ9UIF8 2168 aaKnown RBP23.49■■□□□ 1.35
TSSC4-206ENST00000440813 DNAJC25-GNG10A0A024R161 153 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 POTEFA5A3E0 1075 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 NFIBO00712 420 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 PLEKHA8P1O95397 391 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 CACNB2Q08289 660 aaPredicted RBP23.48■■□□□ 1.35
TSSC4-206ENST00000440813 APOBRQ0VD83 1088 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 OLFML2BQ68BL8 750 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 FBXO11Q86XK2 927 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 FANCBQ8NB91 859 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 PIGSQ96S52 555 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 TM6SF1Q9BZW5 370 aa23.48■■□□□ 1.35
TSSC4-206ENST00000440813 MYH6P13533 1939 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 ZBTB5O15062 677 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 ZBTB43O43298 467 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 GNAQP50148 359 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 CMTR1Q8N1G2 835 aaKnown RBP23.47■■□□□ 1.35
TSSC4-206ENST00000440813 CLEC4DQ8WXI8 215 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 MTMR8Q96EF0 704 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 HMX1Q9NP08 348 aaPredicted RBP23.47■■□□□ 1.35
TSSC4-206ENST00000440813 DIS3Q9Y2L1 958 aaKnown RBP23.47■■□□□ 1.35
TSSC4-206ENST00000440813 PLXNA1Q9UIW2 1896 aa23.47■■□□□ 1.35
TSSC4-206ENST00000440813 KIAA0100Q14667 2235 aaKnown RBP23.47■■□□□ 1.35
TSSC4-206ENST00000440813 POTEB2H3BUK9 544 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 PFASO15067 1338 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 CNTN2Q02246 1040 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 MAP3K21Q5TCX8 1036 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 RPTORQ8N122 1335 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 SRBD1Q8N5C6 995 aaKnown RBP23.46■■□□□ 1.35
TSSC4-206ENST00000440813 LZTS2Q9BRK4 669 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 CYP39A1Q9NYL5 469 aa23.46■■□□□ 1.35
TSSC4-206ENST00000440813 ABCB11O95342 1321 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 GOLGA8AA7E2F4 631 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 GOLGA8BA8MQT2 603 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 PPP1R11O60927 126 aaPredicted RBP23.45■■□□□ 1.34
TSSC4-206ENST00000440813 ANAPC15P60006 121 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 CCDC82Q8N4S0 544 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 SPZ1Q9BXG8 430 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 AMNQ9BXJ7 453 aa23.45■■□□□ 1.34
TSSC4-206ENST00000440813 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.45■■□□□ 1.34
TSSC4-206ENST00000440813 PTPDC1A2A3K4 754 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 IGHA2P01877 340 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 EN2P19622 333 aaPredicted RBP23.44■■□□□ 1.34
TSSC4-206ENST00000440813 CCND3P30281 292 aaPredicted RBP23.44■■□□□ 1.34
TSSC4-206ENST00000440813 BAATQ14032 418 aaPredicted RBP23.44■■□□□ 1.34
TSSC4-206ENST00000440813 RTN1Q16799 776 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 TMTC3Q6ZXV5 915 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 FBXL16Q8N461 479 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 FAM133AQ8N9E0 248 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 DEFB118Q96PH6 123 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 TINF2Q9BSI4 451 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 AGXT2Q9BYV1 514 aa23.44■■□□□ 1.34
TSSC4-206ENST00000440813 PNMA6FA0A0J9YX94 578 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 GJB1P08034 283 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 SMARCA1P28370 1054 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 PRAMEF19Q5SWL8 479 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 RNF207Q6ZRF8 634 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 RRP36Q96EU6 259 aaKnown RBP23.43■■□□□ 1.34
TSSC4-206ENST00000440813 FGD4Q96M96 766 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 PURBQ96QR8 312 aaKnown RBP23.43■■□□□ 1.34
TSSC4-206ENST00000440813 PAK6Q9NQU5 681 aaPredicted RBP23.43■■□□□ 1.34
TSSC4-206ENST00000440813 PDRG1Q9NUG6 133 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 RBM28Q9NW13 759 aaKnown RBP23.43■■□□□ 1.34
TSSC4-206ENST00000440813 MRPL11Q9Y3B7 192 aaKnown RBP23.43■■□□□ 1.34
TSSC4-206ENST00000440813 PCDHA1Q9Y5I3 950 aa23.43■■□□□ 1.34
TSSC4-206ENST00000440813 SOWAHBA6NEL2 793 aa23.42■■□□□ 1.34
TSSC4-206ENST00000440813 CALML3P27482 149 aa23.42■■□□□ 1.34
TSSC4-206ENST00000440813 CNGA1P29973 690 aa23.42■■□□□ 1.34
TSSC4-206ENST00000440813 TOB2Q14106 344 aaPredicted RBP23.42■■□□□ 1.34
TSSC4-206ENST00000440813 SLC30A10Q6XR72 485 aa23.42■■□□□ 1.34
TSSC4-206ENST00000440813 TRPV1Q8NER1 839 aa23.42■■□□□ 1.34
TSSC4-206ENST00000440813 CDC27P30260 824 aa23.41■■□□□ 1.34
TSSC4-206ENST00000440813 METAP2P50579 478 aaKnown RBP eCLIP23.41■■□□□ 1.34
TSSC4-206ENST00000440813 ZNF467Q7Z7K2 595 aaPredicted RBP23.41■■□□□ 1.34
TSSC4-206ENST00000440813 U2AF1L4Q8WU68 220 aaKnown RBP23.41■■□□□ 1.34
TSSC4-206ENST00000440813 TBC1D5Q92609 795 aa23.41■■□□□ 1.34
TSSC4-206ENST00000440813 LARP6Q9BRS8 491 aaKnown RBP23.41■■□□□ 1.34
TSSC4-206ENST00000440813 SEC63Q9UGP8 760 aaKnown RBP23.41■■□□□ 1.34
TSSC4-206ENST00000440813 hCG_1642624A0A1W2PR95 340 aa23.4■■□□□ 1.34
TSSC4-206ENST00000440813 CYBAP13498 195 aa23.4■■□□□ 1.34
TSSC4-206ENST00000440813 GJA8P48165 433 aa23.4■■□□□ 1.34
TSSC4-206ENST00000440813 RCAN1P53805 252 aa23.4■■□□□ 1.34
TSSC4-206ENST00000440813 RPS6P62753 249 aaKnown RBP23.4■■□□□ 1.34
TSSC4-206ENST00000440813 FAM217BQ9NTX9 383 aaPredicted RBP23.4■■□□□ 1.34
TSSC4-206ENST00000440813 RBBP6Q7Z6E9 1792 aaKnown RBP23.4■■□□□ 1.34
TSSC4-206ENST00000440813 SGPL1O95470 568 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 TFRCP02786 760 aaKnown RBP23.39■■□□□ 1.33
TSSC4-206ENST00000440813 ADD1P35611 737 aaKnown RBP23.39■■□□□ 1.33
TSSC4-206ENST00000440813 TRAF1Q13077 416 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 MAMDC4Q6UXC1 1216 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 MCF2L2Q86YR7 1114 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 MSL3Q8N5Y2 521 aaKnown RBP23.39■■□□□ 1.33
TSSC4-206ENST00000440813 RGS22Q8NE09 1264 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 CNPY2Q9Y2B0 182 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 BRCA2P51587 3418 aa23.39■■□□□ 1.33
TSSC4-206ENST00000440813 ASTN1O14525 1302 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms