RNA–Protein interactions for RNA: ENST00000440539.1

AC253536.4-201, humanhuman

BASIC

Gene AC253536.4, Length 267 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC253536.4-201ENST00000440539 CCDC8Q9H0W5 538 aaPredicted RBP16.65■□□□□ 0.26
AC253536.4-201ENST00000440539 SUGCTQ9HAC7 445 aa16.65■□□□□ 0.26
AC253536.4-201ENST00000440539 IQCF3P0C7M6 154 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 C12orf60Q5U649 245 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 HFE2Q6ZVN8 426 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 C16orf86Q6ZW13 317 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 NEK9Q8TD19 979 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 SLC38A10Q9HBR0 1119 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 ATP8A2Q9NTI2 1148 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 PRKAG3Q9UGI9 489 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 TANC1Q9C0D5 1861 aa16.64■□□□□ 0.25
AC253536.4-201ENST00000440539 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 RAD21O60216 631 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 PDE6AP16499 860 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 SLC4A3P48751 1232 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 ERVK-21P61565 698 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 CNTN2Q02246 1040 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 TRMT2AQ8IZ69 625 aaKnown RBP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 PHOX2BQ99453 314 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 RAVER2Q9HCJ3 691 aaKnown RBP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 NOP58Q9Y2X3 529 aaKnown RBP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 CACNA1AO00555 2505 aa16.63■□□□□ 0.25
AC253536.4-201ENST00000440539 BAZ2AQ9UIF9 1905 aaKnown RBP16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 SIP14410 1827 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 C19orf67A6NJJ6 358 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 KCNJ6P48051 423 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 TGS1Q96RS0 853 aaKnown RBP16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 POLR3EQ9NVU0 708 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
AC253536.4-201ENST00000440539 TCRBV5S4A2TA0A5A2 114 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 USP17L12C9JPN9 530 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 USP17L21D6R901 530 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 F5H6K3 240 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 PTGS1P23219 599 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 ATP8B2P98198 1209 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 ZP2Q05996 745 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 KLRC3Q07444 240 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 FAM50BQ9Y247 325 aa16.61■□□□□ 0.25
AC253536.4-201ENST00000440539 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 NDUFB10O96000 172 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 FDX1P10109 184 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 PTPN5P54829 565 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 WDR5P61964 334 aaKnown RBP16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 PURAQ00577 322 aaKnown RBP16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 BFSP2Q13515 415 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 LRRFIP1Q32MZ4 808 aaKnown RBP16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 RAD9AQ99638 391 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 PRRX2Q99811 253 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 ACAD9Q9H845 621 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 PDGFCQ9NRA1 345 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
AC253536.4-201ENST00000440539 ANP32CO43423 234 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 DUSP28Q4G0W2 176 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 ANKS1AQ92625 1134 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 ZBED2Q9BTP6 218 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 A1CFQ9NQ94 594 aaKnown RBP16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 FEM1BQ9UK73 627 aa16.59■□□□□ 0.25
AC253536.4-201ENST00000440539 C5orf42Q9H799 3197 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 CYP2D7A0A087X1C5 515 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 LINC01553A4QN01 128 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 PRKAB2O43741 272 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 GJB5O95377 273 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 PTPN11Q06124 597 aaPredicted RBP16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 TMEM63BQ5T3F8 832 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 BMP8AQ7Z5Y6 402 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 ADHFE1Q8IWW8 467 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 PRSS33Q8NF86 280 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 MTUS1Q9ULD2 1270 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.24
AC253536.4-201ENST00000440539 CPT1AP50416 773 aa16.57■□□□□ 0.24
AC253536.4-201ENST00000440539 COL19A1Q14993 1142 aa16.57■□□□□ 0.24
AC253536.4-201ENST00000440539 PKN1Q16512 942 aa16.57■□□□□ 0.24
AC253536.4-201ENST00000440539 KIAA1211Q6ZU35 1233 aa16.57■□□□□ 0.24
AC253536.4-201ENST00000440539 FBXO16Q8IX29 292 aaPredicted RBP16.57■□□□□ 0.24
AC253536.4-201ENST00000440539 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
AC253536.4-201ENST00000440539 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms