RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
SMAD3-202ENST00000439724 CDC37Q16543 378 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-202ENST00000439724 CIAPIN1Q6FI81 312 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 MTRQ99707 1265 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 CUEDC2Q9H467 287 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 MAGEF1Q9HAY2 307 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 PYCARDQ9ULZ3 195 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 MYH7BA7E2Y1 1941 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 EDIL3O43854 480 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 ATP1A3P13637 1013 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 GSDMDP57764 484 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
SMAD3-202ENST00000439724 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
SMAD3-202ENST00000439724 NAALADL2Q58DX5 795 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 RRAGBQ5VZM2 374 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 PPP4R3AQ6IN85 833 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 MTMR9Q96QG7 549 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 FANCLQ9NW38 375 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-202ENST00000439724 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
SMAD3-202ENST00000439724 PP2D1A8MPX8 630 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 BMP3P12645 472 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
SMAD3-202ENST00000439724 ZNF18P17022 549 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 CASP1P29466 404 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 CDC25AP30304 524 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 TNNI2P48788 182 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMAD3-202ENST00000439724 CUL4BQ13620 913 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 NOLC1Q14978 699 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMAD3-202ENST00000439724 UBE2SQ16763 222 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 SYDE2Q5VT97 1194 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 CABP7Q86V35 215 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 POTEDQ86YR6 584 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 CACTINQ8WUQ7 758 aaKnown RBP13.3□□□□□ -0.28
SMAD3-202ENST00000439724 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
SMAD3-202ENST00000439724 PSTPIP2Q9H939 334 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 ZBTB21Q9ULJ3 1066 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 NFE2L3Q9Y4A8 694 aa13.3□□□□□ -0.28
SMAD3-202ENST00000439724 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 NFKBIEO00221 500 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 RAD21O60216 631 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 TDP2O95551 362 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 LRMPQ12912 555 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 TNIP1Q15025 636 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 CALCRLQ16602 461 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 STAMQ92783 540 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 MED15Q96RN5 788 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 AMNQ9BXJ7 453 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 VEZTQ9HBM0 779 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 KBTBD4Q9NVX7 518 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 CD2APQ9Y5K6 639 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 SYNRGQ9UMZ2 1314 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 TMEM232C9JQI7 657 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 WNT10BO00744 389 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 SLC37A4O43826 429 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 SERPINC1P01008 464 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 RPN1P04843 607 aaKnown RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 RPS12P25398 132 aaKnown RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 UBASH3AP57075 661 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 MAP3K10Q02779 954 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 AP3B2Q13367 1082 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 KCNB1Q14721 858 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 ZNF658Q5TYW1 1059 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 TEX2Q8IWB9 1127 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 TRMT44Q8IYL2 757 aaKnown RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 CCDC150Q8NCX0 1101 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 NUP88Q99567 741 aaPredicted RBP13.29□□□□□ -0.28
SMAD3-202ENST00000439724 BLZF1Q9H2G9 400 aa13.29□□□□□ -0.28
SMAD3-202ENST00000439724 PLCG1P19174 1290 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 TECP42680 631 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 TMEM266Q2M3C6 531 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 FBXO11Q86XK2 927 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 DPF2Q92785 391 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 MMTAG2Q9BU76 263 aaKnown RBP13.28□□□□□ -0.28
SMAD3-202ENST00000439724 RAB34Q9BZG1 259 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
SMAD3-202ENST00000439724 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms