RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 BCL9O00512 1426 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 PLEKP08567 350 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 PLCD1P51178 756 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 KLHL7Q8IXQ5 586 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 TBC1D31Q96DN5 1066 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 RIOK1Q9BRS2 568 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 CAPS2Q9BXY5 557 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 MMRN2Q9H8L6 949 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 EFCC1Q9HA90 598 aa11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 SEC63Q9UGP8 760 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 LUC7L2Q9Y383 392 aaKnown RBP11.08□□□□□ -0.64
CDC42SE1-202ENST00000439374 BAG3O95817 575 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 MYBL1P10243 752 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 TCP10Q12799 353 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 PKN1Q16512 942 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 TMTC3Q6ZXV5 915 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 BLIDQ8IZY5 108 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 ARL8AQ96BM9 186 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 MS4A14Q96JA4 679 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 KLRF2D3W0D1 207 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 GTF2IP78347 998 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 TROAPQ12815 778 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 TRAPPC3LQ5T215 181 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 LACRTQ9GZZ8 138 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 AGPAT5Q9NUQ2 364 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 DMGDHQ9UI17 866 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 TTC26A0AVF1 554 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 KCNJ18B7U540 433 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 AKR1B10O60218 316 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 MOCS3O95396 460 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 KCNJ12Q14500 433 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 NFRKBQ6P4R8 1299 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 ADAT2Q7Z6V5 191 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 COA7Q96BR5 231 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 MXD3Q9BW11 206 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 ZNHIT6Q9NWK9 470 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-202ENST00000439374 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 SLC16A2P36021 539 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 PEX19P40855 299 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 CNGA4Q8IV77 575 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 LRRC1Q9BTT6 524 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 GOLPH3Q9H4A6 298 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 NLRC4Q9NPP4 1024 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 TCP11L1Q9NUJ3 509 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 RBM28Q9NW13 759 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 CALM1P0DP23 149 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 CALM2P0DP24 149 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 CALM3P0DP25 149 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 BTDP43251 543 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 CACNB3P54284 484 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 PAK1Q13153 545 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 MORC3Q14149 939 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 SEC23AQ15436 765 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 OR2W6PQ8NHA6 318 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 ZNF384Q8TF68 577 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 SHISA4Q96DD7 197 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 ZNF512BQ96KM6 892 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 LRWD1Q9UFC0 647 aa11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDC42SE1-202ENST00000439374 E7EVH7 732 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PDE2AO00408 941 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PRPF3O43395 683 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PDE4DQ08499 809 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 SPATA1Q5VX52 437 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 TAX1BP1Q86VP1 789 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 EYA3Q99504 573 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 TMEM60Q9H2L4 133 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 ABHD10Q9NUJ1 306 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 NDUFA10O95299 355 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 SCP2P22307 547 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 CACNB1Q02641 598 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 NR1I3Q14994 352 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PPP2R5AQ15172 486 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 AMIGO3Q86WK7 504 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PRPF38AQ8NAV1 312 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 ENOX1Q8TC92 643 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 CCDC47Q96A33 483 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 SLC39A2Q9NP94 309 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 GGT7Q9UJ14 662 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 PNPLA7Q6ZV29 1317 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 MRC1P22897 1456 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 EP400Q96L91 3159 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 SMCO2A6NFE2 343 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 MAP2K7O14733 419 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 KRT18P05783 430 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 GUCY2CP25092 1073 aa11.05□□□□□ -0.64
CDC42SE1-202ENST00000439374 HNRNPH1P31943 449 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms