RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 MUM1L1Q5H9M0 696 aa19.62■□□□□ 0.73
TARDBP-203ENST00000439080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.62■□□□□ 0.73
TARDBP-203ENST00000439080 PIBF1Q8WXW3 757 aa19.62■□□□□ 0.73
TARDBP-203ENST00000439080 ALDH8A1Q9H2A2 487 aaPredicted RBP19.62■□□□□ 0.73
TARDBP-203ENST00000439080 MCM3APO60318 1980 aa19.62■□□□□ 0.73
TARDBP-203ENST00000439080 PPP1R11O60927 126 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-203ENST00000439080 SMARCA1P28370 1054 aa19.61■□□□□ 0.73
TARDBP-203ENST00000439080 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
TARDBP-203ENST00000439080 CDC27P30260 824 aa19.61■□□□□ 0.73
TARDBP-203ENST00000439080 FBXO11Q86XK2 927 aa19.61■□□□□ 0.73
TARDBP-203ENST00000439080 FAM217BQ9NTX9 383 aaPredicted RBP19.61■□□□□ 0.73
TARDBP-203ENST00000439080 ABCB11O95342 1321 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 ADCY3O60266 1144 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 ELNP15502 786 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 SLC9C1Q4G0N8 1177 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 TNS4Q8IZW8 715 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 ANKRD35Q8N283 1001 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 CCDC82Q8N4S0 544 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 SLAIN1Q8ND83 568 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 RRP36Q96EU6 259 aaKnown RBP19.6■□□□□ 0.73
TARDBP-203ENST00000439080 AMNQ9BXJ7 453 aa19.6■□□□□ 0.73
TARDBP-203ENST00000439080 A1CFQ9NQ94 594 aaKnown RBP19.6■□□□□ 0.73
TARDBP-203ENST00000439080 SEC63Q9UGP8 760 aaKnown RBP19.6■□□□□ 0.73
TARDBP-203ENST00000439080 PFASO15067 1338 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 CCDC196A0A1B0GTZ2 297 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 NFIBO00712 420 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 PGK2P07205 417 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 HOXC6P09630 235 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 XRCC5P13010 732 aaKnown RBP19.59■□□□□ 0.73
TARDBP-203ENST00000439080 CCT2P78371 535 aaKnown RBP19.59■□□□□ 0.73
TARDBP-203ENST00000439080 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 NOL8Q76FK4 1167 aaKnown RBP19.59■□□□□ 0.73
TARDBP-203ENST00000439080 DPP9Q86TI2 863 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 SH3TC2Q8TF17 1288 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 ZNF274Q96GC6 653 aaPredicted RBP19.59■□□□□ 0.73
TARDBP-203ENST00000439080 NCOA5Q9HCD5 579 aaKnown RBP19.59■□□□□ 0.73
TARDBP-203ENST00000439080 TPCN1Q9ULQ1 816 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 FRMPD3Q5JV73 1810 aa19.59■□□□□ 0.73
TARDBP-203ENST00000439080 PNMA6FA0A0J9YX94 578 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 COBLO75128 1261 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 GRK4P32298 578 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 ADD1P35611 737 aaKnown RBP19.58■□□□□ 0.73
TARDBP-203ENST00000439080 FUT2Q10981 343 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 STK3Q13188 491 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 NPLOC4Q8TAT6 608 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 PXYLP1Q8TE99 480 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 CLEC4DQ8WXI8 215 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 TRIB2Q92519 343 aa19.58■□□□□ 0.73
TARDBP-203ENST00000439080 hCG_1642624A0A1W2PR95 340 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 RABEP1Q15276 862 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 CCL14Q16627 93 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 NSMFQ6X4W1 530 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 SLC5A4Q9NY91 659 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 PCDHA1Q9Y5I3 950 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 DNAJC25-GNG10A0A024R161 153 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 HMGCRP04035 888 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 SLC30A10Q6XR72 485 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 ARMC5Q96C12 935 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 CYP39A1Q9NYL5 469 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 FLRT1Q9NZU1 646 aa19.57■□□□□ 0.72
TARDBP-203ENST00000439080 MRPL11Q9Y3B7 192 aaKnown RBP19.57■□□□□ 0.72
TARDBP-203ENST00000439080 PTPDC1A2A3K4 754 aa19.56■□□□□ 0.72
TARDBP-203ENST00000439080 INHAP05111 366 aa19.56■□□□□ 0.72
TARDBP-203ENST00000439080 TRAF1Q13077 416 aa19.56■□□□□ 0.72
TARDBP-203ENST00000439080 ZNF792Q3KQV3 632 aa19.56■□□□□ 0.72
TARDBP-203ENST00000439080 TRMT44Q8IYL2 757 aaKnown RBP19.56■□□□□ 0.72
TARDBP-203ENST00000439080 MAML3Q96JK9 1138 aa19.56■□□□□ 0.72
TARDBP-203ENST00000439080 PFKFB2O60825 505 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 LARGE1O95461 756 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 SCRN1Q12765 414 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 NTRK3Q16288 839 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 RNF207Q6ZRF8 634 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 PHKBQ93100 1093 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 ABHD8Q96I13 439 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 ZNF333Q96JL9 665 aa19.55■□□□□ 0.72
TARDBP-203ENST00000439080 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
TARDBP-203ENST00000439080 BIN2Q9UBW5 565 aaPredicted RBP19.55■□□□□ 0.72
TARDBP-203ENST00000439080 POTEB2H3BUK9 544 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 OPLAHO14841 1288 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 TRIM32Q13049 653 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 BAATQ14032 418 aaPredicted RBP19.54■□□□□ 0.72
TARDBP-203ENST00000439080 ME3Q16798 604 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 OLFML2BQ68BL8 750 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 HEATR3Q7Z4Q2 680 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 FAM133AQ8N9E0 248 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 GPKOWQ92917 476 aaPredicted RBP eCLIP19.54■□□□□ 0.72
TARDBP-203ENST00000439080 FGD4Q96M96 766 aa19.54■□□□□ 0.72
TARDBP-203ENST00000439080 DIS3Q9Y2L1 958 aaKnown RBP19.54■□□□□ 0.72
TARDBP-203ENST00000439080 CPLX1O14810 134 aa19.53■□□□□ 0.72
TARDBP-203ENST00000439080 PPFIA3O75145 1194 aa19.53■□□□□ 0.72
TARDBP-203ENST00000439080 IFNAR1P17181 557 aa19.53■□□□□ 0.72
TARDBP-203ENST00000439080 CALML3P27482 149 aa19.53■□□□□ 0.72
TARDBP-203ENST00000439080 RPS6P62753 249 aaKnown RBP19.53■□□□□ 0.72
TARDBP-203ENST00000439080 CNTN2Q02246 1040 aa19.53■□□□□ 0.72
TARDBP-203ENST00000439080 MCF2L2Q86YR7 1114 aa19.53■□□□□ 0.72
TARDBP-203ENST00000439080 V9GY48 417 aaPredicted RBP19.53■□□□□ 0.72
TARDBP-203ENST00000439080 ASTN1O14525 1302 aa19.52■□□□□ 0.72
TARDBP-203ENST00000439080 ST18O60284 1047 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms