RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 LIFRP42702 1097 aa20.76■□□□□ 0.91
NCSTN-208ENST00000438008 COL9A3Q14050 684 aaPredicted RBP20.76■□□□□ 0.91
NCSTN-208ENST00000438008 RASEFQ8IZ41 740 aa20.76■□□□□ 0.91
NCSTN-208ENST00000438008 DIS3LQ8TF46 1054 aaKnown RBP20.76■□□□□ 0.91
NCSTN-208ENST00000438008 MTMR8Q96EF0 704 aa20.76■□□□□ 0.91
NCSTN-208ENST00000438008 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
NCSTN-208ENST00000438008 HTATIP2Q9BUP3 242 aa20.76■□□□□ 0.91
NCSTN-208ENST00000438008 PLXNA1Q9UIW2 1896 aa20.75■□□□□ 0.91
NCSTN-208ENST00000438008 EPB41L2O43491 1005 aaKnown RBP20.75■□□□□ 0.91
NCSTN-208ENST00000438008 REC8O95072 547 aa20.75■□□□□ 0.91
NCSTN-208ENST00000438008 KRT32Q14532 448 aa20.75■□□□□ 0.91
NCSTN-208ENST00000438008 QRICH1Q2TAL8 776 aa20.75■□□□□ 0.91
NCSTN-208ENST00000438008 NSMFQ6X4W1 530 aa20.75■□□□□ 0.91
NCSTN-208ENST00000438008 RGS22Q8NE09 1264 aa20.75■□□□□ 0.91
NCSTN-208ENST00000438008 GPHNQ9NQX3 736 aaPredicted RBP20.75■□□□□ 0.91
NCSTN-208ENST00000438008 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.75■□□□□ 0.91
NCSTN-208ENST00000438008 ASB14A6NK59 587 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
NCSTN-208ENST00000438008 DDAH1O94760 285 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 HSPA4P34932 840 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 BAATQ14032 418 aaPredicted RBP20.74■□□□□ 0.91
NCSTN-208ENST00000438008 ARMCX2Q7L311 632 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 ZNF654Q8IZM8 581 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 ABHD16BQ9H3Z7 469 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 RIOX1Q9H6W3 641 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 VAT1LQ9HCJ6 419 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 ABCB11O95342 1321 aa20.74■□□□□ 0.91
NCSTN-208ENST00000438008 LOC102724159A0A0B4J2E5 919 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 COL6A1P12109 1028 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 AKR1A1P14550 325 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
NCSTN-208ENST00000438008 ACVR2BQ13705 512 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 PWP2Q15269 919 aaKnown RBP20.73■□□□□ 0.91
NCSTN-208ENST00000438008 USH1GQ495M9 461 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 PRPF38BQ5VTL8 546 aaKnown RBP20.73■□□□□ 0.91
NCSTN-208ENST00000438008 DHX32Q7L7V1 743 aaKnown RBP20.73■□□□□ 0.91
NCSTN-208ENST00000438008 FBXO11Q86XK2 927 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 CCDC144CPQ8IYA2 1237 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 C11orf49Q9H6J7 331 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 ASTN1O14525 1302 aa20.73■□□□□ 0.91
NCSTN-208ENST00000438008 PDE4DIPQ5VU43 2346 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 CCDC69A6NI79 296 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 DNM1LO00429 736 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 SLC35G1Q2M3R5 365 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 ADCK5Q3MIX3 580 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 RNF207Q6ZRF8 634 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 SGMS1Q86VZ5 419 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 ARRDC4Q8NCT1 418 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 MORC4Q8TE76 937 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 KATNBL1Q9H079 304 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 ADD3Q9UEY8 706 aaKnown RBP20.72■□□□□ 0.91
NCSTN-208ENST00000438008 FAM184BQ9ULE4 1060 aa20.72■□□□□ 0.91
NCSTN-208ENST00000438008 PTPDC1A2A3K4 754 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 ZBTB5O15062 677 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 CYTH3O43739 400 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
NCSTN-208ENST00000438008 RARBP10826 455 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 SMARCA1P28370 1054 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 KIF5BP33176 963 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 RPS6P62753 249 aaKnown RBP20.71■□□□□ 0.91
NCSTN-208ENST00000438008 ANO1Q5XXA6 986 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 NFXL1Q6ZNB6 911 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 NUP133Q8WUM0 1156 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 AMNQ9BXJ7 453 aa20.71■□□□□ 0.91
NCSTN-208ENST00000438008 ZHX1Q9UKY1 873 aaPredicted RBP20.71■□□□□ 0.91
NCSTN-208ENST00000438008 MRPL11Q9Y3B7 192 aaKnown RBP20.71■□□□□ 0.91
NCSTN-208ENST00000438008 SMCHD1A6NHR9 2005 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 CALM1P0DP23 149 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 CALM2P0DP24 149 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 CALM3P0DP25 149 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 SLC30A10Q6XR72 485 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 CTCFLQ8NI51 663 aaPredicted RBP20.7■□□□□ 0.9
NCSTN-208ENST00000438008 DPF3Q92784 378 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 PURBQ96QR8 312 aaKnown RBP20.7■□□□□ 0.9
NCSTN-208ENST00000438008 LZTS2Q9BRK4 669 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
NCSTN-208ENST00000438008 PPP1R11O60927 126 aaPredicted RBP20.69■□□□□ 0.9
NCSTN-208ENST00000438008 CALML3P27482 149 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 GNAQP50148 359 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 ALDH5A1P51649 535 aaPredicted RBP20.69■□□□□ 0.9
NCSTN-208ENST00000438008 TRAF1Q13077 416 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 MCF2L2Q86YR7 1114 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 PIGSQ96S52 555 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 MYL10Q9BUA6 226 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 XPNPEP3Q9NQH7 507 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 SNX14Q9Y5W7 946 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 SLC12A7Q9Y666 1083 aa20.69■□□□□ 0.9
NCSTN-208ENST00000438008 LRRC41Q15345 812 aa20.68■□□□□ 0.9
NCSTN-208ENST00000438008 CCDC144BQ3MJ40 725 aa20.68■□□□□ 0.9
NCSTN-208ENST00000438008 GJC2Q5T442 439 aaPredicted RBP20.68■□□□□ 0.9
NCSTN-208ENST00000438008 DNERQ8NFT8 737 aa20.68■□□□□ 0.9
NCSTN-208ENST00000438008 SPZ1Q9BXG8 430 aa20.68■□□□□ 0.9
NCSTN-208ENST00000438008 FRMPD3Q5JV73 1810 aa20.68■□□□□ 0.9
NCSTN-208ENST00000438008 PNMA6FA0A0J9YX94 578 aa20.67■□□□□ 0.9
NCSTN-208ENST00000438008 DUSP11O75319 330 aaKnown RBP20.67■□□□□ 0.9
NCSTN-208ENST00000438008 GHRHRQ02643 423 aa20.67■□□□□ 0.9
NCSTN-208ENST00000438008 HOMER1Q86YM7 354 aa20.67■□□□□ 0.9
NCSTN-208ENST00000438008 TBC1D5Q92609 795 aa20.67■□□□□ 0.9
NCSTN-208ENST00000438008 USP26Q9BXU7 913 aa20.67■□□□□ 0.9
NCSTN-208ENST00000438008 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms