RNA–Protein interactions for RNA: ENST00000437188.1

RPSAP28-201, Transcript of ribosomal protein SA pseudogene 28, humanhuman

BASIC

Gene RPSAP28, Length 874 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP28-201ENST00000437188 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 SPECC1LQ69YQ0 1117 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 APOBEC3FQ8IUX4 373 aaKnown RBP11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 ZNF444Q8N0Y2 327 aaPredicted RBP11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 SPATA20Q8TB22 786 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 CSRNP2Q9H175 543 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 DEFB129Q9H1M3 183 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 MAGEF1Q9HAY2 307 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 VPS54Q9P1Q0 977 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 PHLPP2Q6ZVD8 1323 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 MYO3BQ8WXR4 1341 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 CNTNAP5Q8WYK1 1306 aa11.24□□□□□ -0.61
RPSAP28-201ENST00000437188 NAV1Q8NEY1 1877 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 CLRN2A0PK11 232 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 STX10O60499 249 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 ATP2B1P20020 1258 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 PPP4CP60510 307 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 TUBB4BP68371 445 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 NR5A1Q13285 461 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 STIM1Q13586 685 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 TRIM14Q14142 442 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 PKN1Q16512 942 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 PPP4R3BQ5MIZ7 849 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 OTOP1Q7RTM1 612 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 PPFIBP1Q86W92 1011 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 CD99L2Q8TCZ2 262 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 CCDC51Q96ER9 411 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 FANCLQ9NW38 375 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 JAG2Q9Y219 1238 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 TACC3Q9Y6A5 838 aa11.23□□□□□ -0.61
RPSAP28-201ENST00000437188 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 MANSC4A6NHS7 340 aaPredicted RBP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 hCG_1984214I3L0E3 225 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 IGF2BP3O00425 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 GTPBP6O43824 516 aaPredicted RBP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 SMARCA1P28370 1054 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 TUBB2AQ13885 445 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 GRM4Q14833 912 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 C12orf60Q5U649 245 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 ZNF713Q8N859 430 aaPredicted RBP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 DHX58Q96C10 678 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 WNK4Q96J92 1243 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 PPP1R13BQ96KQ4 1090 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 PANX2Q96RD6 677 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 TUBB2BQ9BVA1 445 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 CUEDC2Q9H467 287 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 VEZTQ9HBM0 779 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.22□□□□□ -0.61
RPSAP28-201ENST00000437188 CENPFP49454 3210 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 PLEKHA8P1O95397 391 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 MYCP01106 439 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 TSPY3P0CV98 308 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 TSPY8P0CW00 308 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 ZNF18P17022 549 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 EN2P19622 333 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 INHBEP58166 350 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 NBPF12Q5TAG4 269 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 ISM2Q6H9L7 571 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 NKX2-3Q8TAU0 364 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 PAGE5Q96GU1 130 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 ZBED3Q96IU2 234 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 BAG1Q99933 345 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 CFHR5Q9BXR6 569 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 TMX1Q9H3N1 280 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 CD209Q9NNX6 404 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 ARGLU1Q9NWB6 273 aaPredicted RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 TRMT1Q9NXH9 659 aaKnown RBP11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 PTPN22Q9Y2R2 807 aa11.21□□□□□ -0.61
RPSAP28-201ENST00000437188 MKI67P46013 3256 aaKnown RBP11.21□□□□□ -0.62
RPSAP28-201ENST00000437188 A0A087WWV3 80 aa11.2□□□□□ -0.62
RPSAP28-201ENST00000437188 PRDM1O75626 825 aa11.2□□□□□ -0.62
RPSAP28-201ENST00000437188 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
RPSAP28-201ENST00000437188 GNA11P29992 359 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms