RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 U2AF2P26368 475 aaKnown RBP eCLIP15.4■□□□□ 0.066e-8■■■□□ 14.9
RPE-208ENST00000436630 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
RPE-208ENST00000436630 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
RPE-208ENST00000436630 TYW1BQ6NUM6 668 aa15.4■□□□□ 0.06
RPE-208ENST00000436630 BLIDQ8IZY5 108 aa15.4■□□□□ 0.06
RPE-208ENST00000436630 REXO1Q8N1G1 1221 aaKnown RBP15.4■□□□□ 0.06
RPE-208ENST00000436630 RIC8AQ9NPQ8 531 aa15.4■□□□□ 0.06
RPE-208ENST00000436630 ZNF214Q9UL59 606 aaPredicted RBP15.4■□□□□ 0.06
RPE-208ENST00000436630 KCNJ14Q9UNX9 436 aa15.4■□□□□ 0.06
RPE-208ENST00000436630 ZNF536O15090 1300 aa15.4■□□□□ 0.06
RPE-208ENST00000436630 RESTQ13127 1097 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 NPY5RQ15761 445 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 USH1GQ495M9 461 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 ATL3Q6DD88 541 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 MCF2L2Q86YR7 1114 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 SMCR8Q8TEV9 937 aaPredicted RBP15.39■□□□□ 0.05
RPE-208ENST00000436630 COA7Q96BR5 231 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 SHISA4Q96DD7 197 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 PSTPIP2Q9H939 334 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 GJB4Q9NTQ9 266 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 MAP3K20Q9NYL2 800 aaKnown RBP15.39■□□□□ 0.05
RPE-208ENST00000436630 ZDHHC9Q9Y397 364 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 RABGAP1Q9Y3P9 1069 aa15.39■□□□□ 0.05
RPE-208ENST00000436630 SMCHD1A6NHR9 2005 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 CEP350Q5VT06 3117 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 PIK3CDO00329 1044 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 HSPA6P17066 643 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 SNAP25P60880 206 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 GHRHRQ02643 423 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 AP3B2Q13367 1082 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 TMEM132BQ14DG7 1078 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 DEFB115Q30KQ5 88 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 SNRNP48Q6IEG0 339 aaKnown RBP15.38■□□□□ 0.05
RPE-208ENST00000436630 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
RPE-208ENST00000436630 KRT25Q7Z3Z0 450 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 GBP4Q96PP9 640 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 P2RX7Q99572 595 aaKnown RBP15.38■□□□□ 0.05
RPE-208ENST00000436630 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
RPE-208ENST00000436630 FBXO40Q9UH90 709 aa15.38■□□□□ 0.05
RPE-208ENST00000436630 CCDC194A0A1B0GVG4 234 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 SLC25A27O95847 323 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 FOSP01100 380 aaPredicted RBP15.37■□□□□ 0.05
RPE-208ENST00000436630 STAT3P40763 770 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 CCNA1P78396 465 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 FERMT3Q86UX7 667 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 RIOX2Q8IUF8 465 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 CHST13Q8NET6 341 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 EHMT1Q9H9B1 1298 aa15.37■□□□□ 0.05
RPE-208ENST00000436630 NOL7Q9UMY1 257 aaKnown RBP15.37■□□□□ 0.05
RPE-208ENST00000436630 BTBD18B2RXH4 712 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 M0R2N6 131 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 ALDH1A1P00352 501 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 ALAS1P13196 640 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 TM4SF4P48230 202 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 TRAPPC10P48553 1259 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 RILPL1Q5EBL4 403 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 CLEC17AQ6ZS10 378 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
RPE-208ENST00000436630 IFNL1Q8IU54 200 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 FAM43AQ8N2R8 423 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 SHCBP1Q8NEM2 672 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 TNPO1Q92973 898 aaKnown RBP15.36■□□□□ 0.05
RPE-208ENST00000436630 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 CAPNS2Q96L46 248 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 AGBL1Q96MI9 1066 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 ZNF396Q96N95 335 aaPredicted RBP15.36■□□□□ 0.05
RPE-208ENST00000436630 SPATC1LQ9H0A9 340 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 ACAD9Q9H845 621 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 TCHHQ07283 1943 aa15.36■□□□□ 0.05
RPE-208ENST00000436630 KIF28PB7ZC32 967 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
RPE-208ENST00000436630 POLR2MP0CAP2 368 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
RPE-208ENST00000436630 PLS1Q14651 629 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
RPE-208ENST00000436630 MYSM1Q5VVJ2 828 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
RPE-208ENST00000436630 TRERF1Q96PN7 1200 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 PTPN18Q99952 460 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 MORF4L1Q9UBU8 362 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 PFASO15067 1338 aa15.35■□□□□ 0.05
RPE-208ENST00000436630 SPDYE3A6NKU9 549 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 IGF2BP3O00425 579 aaKnown RBP eCLIP15.34■□□□□ 0.05
RPE-208ENST00000436630 OPLAHO14841 1288 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 HSD17B4P51659 736 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 ERVK-9P63128 1117 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 ERVK-24P63145 666 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 KRT85P78386 507 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 NR5A1Q13285 461 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 ORC2Q13416 577 aaPredicted RBP15.34■□□□□ 0.05
RPE-208ENST00000436630 NONOQ15233 471 aaKnown RBP eCLIP15.34■□□□□ 0.05
RPE-208ENST00000436630 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
RPE-208ENST00000436630 CSPP1Q1MSJ5 1256 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 FAM110CQ1W6H9 321 aa15.34■□□□□ 0.05
RPE-208ENST00000436630 GPRC5AQ8NFJ5 357 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms