RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 TKFCQ3LXA3 575 aa17.96■□□□□ 0.47
NELFE-204ENST00000436289 HERC6Q8IVU3 1022 aa17.96■□□□□ 0.47
NELFE-204ENST00000436289 GJD3Q8N144 294 aa17.96■□□□□ 0.47
NELFE-204ENST00000436289 RETREG2Q8NC44 543 aa17.96■□□□□ 0.47
NELFE-204ENST00000436289 KHSRPQ92945 711 aaKnown RBP eCLIP17.96■□□□□ 0.47
NELFE-204ENST00000436289 MKL1Q969V6 931 aa17.96■□□□□ 0.47
NELFE-204ENST00000436289 NUP88Q99567 741 aaPredicted RBP17.96■□□□□ 0.47
NELFE-204ENST00000436289 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
NELFE-204ENST00000436289 ARPP21Q9UBL0 812 aaPredicted RBP17.96■□□□□ 0.47
NELFE-204ENST00000436289 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
NELFE-204ENST00000436289 FAM86C2PA6NEL3 165 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 SMPD1P17405 629 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 ADD2P35612 726 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 MRE11P49959 708 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 DEFB128Q7Z7B8 93 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 CLASRPQ8N2M8 674 aaKnown RBP17.95■□□□□ 0.46
NELFE-204ENST00000436289 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 ZNF287Q9HBT7 754 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 TNKSO95271 1327 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 LRRC37A2A6NM11 1700 aa17.95■□□□□ 0.46
NELFE-204ENST00000436289 CYP2D7A0A087X1C5 515 aa17.94■□□□□ 0.46
NELFE-204ENST00000436289 EPOPA6NHQ4 379 aa17.94■□□□□ 0.46
NELFE-204ENST00000436289 CNTN2Q02246 1040 aa17.94■□□□□ 0.46
NELFE-204ENST00000436289 UBE3CQ15386 1083 aa17.94■□□□□ 0.46
NELFE-204ENST00000436289 PUS10Q3MIT2 529 aaKnown RBP17.94■□□□□ 0.46
NELFE-204ENST00000436289 DNAJC2Q99543 621 aaKnown RBP17.94■□□□□ 0.46
NELFE-204ENST00000436289 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
NELFE-204ENST00000436289 SLC4A4Q9Y6R1 1079 aa17.94■□□□□ 0.46
NELFE-204ENST00000436289 ZBED9Q6R2W3 1325 aa17.94■□□□□ 0.46
NELFE-204ENST00000436289 MCM3APO60318 1980 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.93■□□□□ 0.46
NELFE-204ENST00000436289 PSMC6P62333 389 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 BFSP2Q13515 415 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 LEXMQ3ZCV2 418 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
NELFE-204ENST00000436289 KRT40Q6A162 431 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 SNX27Q96L92 541 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.46
NELFE-204ENST00000436289 VTA1Q9NP79 307 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 CLIP2Q9UDT6 1046 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 BRWD1Q9NSI6 2320 aa17.93■□□□□ 0.46
NELFE-204ENST00000436289 LOC102724159A0A0B4J2E5 919 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 SOWAHBA6NEL2 793 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 KPNA6O60684 536 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 LPXNO60711 386 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
NELFE-204ENST00000436289 IQCF3P0C7M6 154 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 CPT1AP50416 773 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 PTPN11Q06124 597 aaPredicted RBP17.92■□□□□ 0.46
NELFE-204ENST00000436289 PWP2Q15269 919 aaKnown RBP17.92■□□□□ 0.46
NELFE-204ENST00000436289 LRRFIP1Q32MZ4 808 aaKnown RBP17.92■□□□□ 0.46
NELFE-204ENST00000436289 DUSP28Q4G0W2 176 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 SBK1Q52WX2 424 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 TAPT1Q6NXT6 567 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 GIMAP6Q6P9H5 292 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 GMCL1P1Q8NEA9 526 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 RHPN1Q8TCX5 695 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 CHURC1Q8WUH1 139 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 C1orf115Q9H7X2 142 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 CD320Q9NPF0 282 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 A1CFQ9NQ94 594 aaKnown RBP17.92■□□□□ 0.46
NELFE-204ENST00000436289 TRMT13Q9NUP7 481 aaKnown RBP17.92■□□□□ 0.46
NELFE-204ENST00000436289 PAG1Q9NWQ8 432 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 TNNQ9UQP3 1299 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 EXOC6BQ9Y2D4 811 aa17.92■□□□□ 0.46
NELFE-204ENST00000436289 CYP2C9P11712 490 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 RASA1P20936 1047 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 KCNJ6P48051 423 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 NFRKBQ6P4R8 1299 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 FAM160B2Q86V87 743 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 FTSJ3Q8IY81 847 aaKnown RBP17.91■□□□□ 0.46
NELFE-204ENST00000436289 MTG1Q9BT17 334 aaPredicted RBP17.91■□□□□ 0.46
NELFE-204ENST00000436289 UBE2ZQ9H832 354 aaPredicted RBP17.91■□□□□ 0.46
NELFE-204ENST00000436289 HOMER2Q9NSB8 354 aa17.91■□□□□ 0.46
NELFE-204ENST00000436289 PARNO95453 639 aaKnown RBP17.9■□□□□ 0.46
NELFE-204ENST00000436289 BMP3P12645 472 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 CEP85Q6P2H3 762 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 ZNF444Q8N0Y2 327 aaPredicted RBP17.9■□□□□ 0.46
NELFE-204ENST00000436289 MORC4Q8TE76 937 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 UIMC1Q96RL1 719 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 IL1RAPL2Q9NP60 686 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 RNF146Q9NTX7 359 aa17.9■□□□□ 0.46
NELFE-204ENST00000436289 PLA2G6O60733 806 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 TTLL1O95922 423 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 SSTR3P32745 418 aaPredicted RBP17.89■□□□□ 0.45
NELFE-204ENST00000436289 STAT2P52630 851 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 PURAQ00577 322 aaKnown RBP17.89■□□□□ 0.45
NELFE-204ENST00000436289 NHLH1Q02575 133 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 CCDC155Q8N6L0 562 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 TRERF1Q96PN7 1200 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 ZBED2Q9BTP6 218 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 PDGFCQ9NRA1 345 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 MTMR4Q9NYA4 1195 aa17.89■□□□□ 0.45
NELFE-204ENST00000436289 ADD3Q9UEY8 706 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms