RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 IGSF3O75054 1194 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01516-201ENST00000436140 SYDE2Q5VT97 1194 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 CCDC12Q8WUD4 166 aaPredicted RBP12.36□□□□□ -0.43
LINC01516-201ENST00000436140 WRNIP1Q96S55 665 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 NAV1Q8NEY1 1877 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 NEMFO60524 1076 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 SMC2O95347 1197 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 ERCC3P19447 782 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 HPS3Q969F9 1004 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 AGBL1Q96MI9 1066 aa12.36□□□□□ -0.43
LINC01516-201ENST00000436140 HERC5Q9UII4 1024 aaKnown RBP12.36□□□□□ -0.43
LINC01516-201ENST00000436140 M0R2N6 131 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 CUL4BQ13620 913 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 GPR162Q16538 588 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
LINC01516-201ENST00000436140 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 ESPNB1AK53 854 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 STAT2P52630 851 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
LINC01516-201ENST00000436140 MTMR2Q13614 643 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 IQCB1Q15051 598 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 RBM43Q6ZSC3 357 aaKnown RBP12.35□□□□□ -0.43
LINC01516-201ENST00000436140 CUL5Q93034 780 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 PAGE5Q96GU1 130 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 ZHX2Q9Y6X8 837 aa12.35□□□□□ -0.43
LINC01516-201ENST00000436140 FZD9O00144 591 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 STAT3P40763 770 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 STAT6P42226 847 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 NOVP48745 357 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 PRR16Q569H4 304 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 EAPPQ56P03 285 aaPredicted RBP12.34□□□□□ -0.43
LINC01516-201ENST00000436140 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
LINC01516-201ENST00000436140 C4orf32Q8N8J7 132 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 SH3GLB2Q9NR46 395 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 MAN1B1Q9UKM7 699 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 EDIL3O43854 480 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 FMR1Q06787 632 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC01516-201ENST00000436140 KRT25Q7Z3Z0 450 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 MKL1Q969V6 931 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 TEPSINQ96N21 525 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 PPP1R9BQ96SB3 815 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 SMCHD1A6NHR9 2005 aa12.34□□□□□ -0.43
LINC01516-201ENST00000436140 ADM5C9JUS6 153 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.43
LINC01516-201ENST00000436140 SORBS3O60504 671 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 LRMPQ12912 555 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 CALCRLQ16602 461 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 C9orf131Q5VYM1 1079 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 RRAGBQ5VZM2 374 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 DYMQ7RTS9 669 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 CCDC186Q7Z3E2 898 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 MTRQ99707 1265 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 AMNQ9BXJ7 453 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.43
LINC01516-201ENST00000436140 FANCLQ9NW38 375 aa12.33□□□□□ -0.43
LINC01516-201ENST00000436140 MYH6P13533 1939 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 FLOT1O75955 427 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 PTGS1P23219 599 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 ZNF76P36508 570 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 CACNB1Q02641 598 aaPredicted RBP12.33□□□□□ -0.44
LINC01516-201ENST00000436140 GOLGA8FQ08AF8 430 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 GOLGA8DPQ0D2H9 430 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 TTLL12Q14166 644 aaPredicted RBP12.33□□□□□ -0.44
LINC01516-201ENST00000436140 LRRC15Q8TF66 581 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 ALAS1P13196 640 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 LMNB1P20700 586 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 HMGCS2P54868 508 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 NLRP12P59046 1061 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 TMX2Q9Y320 296 aa12.33□□□□□ -0.44
LINC01516-201ENST00000436140 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 CHMP2AO43633 222 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 ASNSP08243 561 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 CDK11BP21127 795 aaKnown RBP12.32□□□□□ -0.44
LINC01516-201ENST00000436140 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
LINC01516-201ENST00000436140 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 IFNKQ9P0W0 207 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 DDX25Q9UHL0 483 aaKnown RBP12.32□□□□□ -0.44
LINC01516-201ENST00000436140 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
LINC01516-201ENST00000436140 MEIS1O00470 390 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 MDM2Q00987 491 aaPredicted RBP12.32□□□□□ -0.44
LINC01516-201ENST00000436140 PLS1Q14651 629 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 CABP7Q86V35 215 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 IQUBQ8NA54 791 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 ZHX3Q9H4I2 956 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 GDAQ9Y2T3 454 aa12.32□□□□□ -0.44
LINC01516-201ENST00000436140 MAST2Q6P0Q8 1798 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms