RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 FAM178BQ8IXR5 827 aa13.44□□□□□ -0.26
UBE3B-203ENST00000434735 PIGSQ96S52 555 aa13.44□□□□□ -0.26
UBE3B-203ENST00000434735 ARHGEF37A1IGU5 675 aa13.44□□□□□ -0.26
UBE3B-203ENST00000434735 STK10O94804 968 aaKnown RBP13.44□□□□□ -0.26
UBE3B-203ENST00000434735 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
UBE3B-203ENST00000434735 SERPINA10Q9UK55 444 aa13.44□□□□□ -0.26
UBE3B-203ENST00000434735 RIMS1Q86UR5 1692 aaKnown RBP13.44□□□□□ -0.26
UBE3B-203ENST00000434735 GPIHBP1Q8IV16 184 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 CRAMP1Q96RY5 1269 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 RASAL2Q9UJF2 1139 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 MYOM2P54296 1465 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 CYLC1P35663 651 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-203ENST00000434735 UBASH3AP57075 661 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 RASGRF1Q13972 1273 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 LARSQ9P2J5 1176 aaKnown RBP13.43□□□□□ -0.26
UBE3B-203ENST00000434735 RNASE9P60153 205 aaKnown RBP13.43□□□□□ -0.26
UBE3B-203ENST00000434735 NEK8Q86SG6 692 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 DEFB129Q9H1M3 183 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 DISC1Q9NRI5 854 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-203ENST00000434735 ZNF165P49910 485 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 GTF2A2P52657 109 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
UBE3B-203ENST00000434735 CCDC157Q569K6 752 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 FBF1Q8TES7 1133 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 SELENOOQ9BVL4 669 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 UBE3CQ15386 1083 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 ARHGAP44Q17R89 818 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 GEN1Q17RS7 908 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 CTNND2Q9UQB3 1225 aa13.43□□□□□ -0.26
UBE3B-203ENST00000434735 SPOPO43791 374 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 DTNBO60941 627 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 FANCBQ8NB91 859 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 PI4K2BQ8TCG2 481 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 NOC4LQ9BVI4 516 aaKnown RBP13.42□□□□□ -0.26
UBE3B-203ENST00000434735 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 ASB14A6NK59 587 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 STAMQ92783 540 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-203ENST00000434735 SPATA33Q96N06 139 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 GCC2Q8IWJ2 1684 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 RNF180Q86T96 592 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 FGAP02671 866 aa13.42□□□□□ -0.26
UBE3B-203ENST00000434735 DCDC2CA8MYV0 355 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 SKA2Q8WVK7 121 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 SCG2P13521 617 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 KRT40Q6A162 431 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 CTR9Q6PD62 1173 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 GLT1D1Q96MS3 346 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 DSCC1Q9BVC3 393 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ANTXR1Q9H6X2 564 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 FEM1BQ9UK73 627 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ZWINTO95229 277 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 HSPD1P10809 573 aaKnown RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 MXRA7P84157 204 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 STRIP1Q5VSL9 837 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ANKRD13CQ8N6S4 541 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 TFAMQ00059 246 aaKnown RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 CC2D1AQ6P1N0 951 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 LMBR1Q8WVP7 490 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 FAM149B1Q96BN6 582 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ANKRD36BP1Q96IX9 119 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 CCDC42Q96M95 316 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ABCC4O15439 1325 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 ERICH4A6NGS2 130 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 RPS12P25398 132 aaKnown RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 LACTBP83111 547 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-203ENST00000434735 KMT5AQ9NQR1 393 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
UBE3B-203ENST00000434735 CRCPO75575 148 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 MAP7D1Q3KQU3 841 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 GNASQ5JWF2 1037 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 GPRC5AQ8NFJ5 357 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 PSMC4P43686 418 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 BSPRYQ5W0U4 402 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 ARHGEF5Q12774 1597 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 RNF219Q5W0B1 726 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 CFAP57Q96MR6 1250 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 CPA4Q9UI42 421 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 PRDM15P57071 1507 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-203ENST00000434735 COPRSQ9NQ92 184 aa13.4□□□□□ -0.26
UBE3B-203ENST00000434735 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 DDAH1O94760 285 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms