RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ATP8A2Q9NTI2 1148 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 CLIP2Q9UDT6 1046 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 MINPP1Q9UNW1 487 aa8.53□□□□□ -1.04
COL17A1-204ENST00000433822 COL1A1P02452 1464 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 A0A1B0GVL5 298 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 PRPF3O43395 683 aaKnown RBP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 NRDCO43847 1150 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 DTNBO60941 627 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 CYP7A1P22680 504 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 PTGS1P23219 599 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 RNF144AP50876 292 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 SPTY2D1Q68D10 685 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 PRICKLE2Q7Z3G6 844 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 PODNQ7Z5L7 613 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 IQCA1Q86XH1 822 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 LRRC8AQ8IWT6 810 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 FANCBQ8NB91 859 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 LINC00116Q8NCU8 138 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 PYM1Q9BRP8 204 aaKnown RBP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
COL17A1-204ENST00000433822 PAXBP1Q9Y5B6 917 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 CNTNAP5Q8WYK1 1306 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 IRS2Q9Y4H2 1338 aa8.52□□□□□ -1.05
COL17A1-204ENST00000433822 ROBO3Q96MS0 1386 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 CTIFO43310 598 aaKnown RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 CBFA2T2O43439 604 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 ADAM23O75077 832 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 WDHD1O75717 1129 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 TRAPPC10P48553 1259 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 RPS8P62241 208 aaKnown RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 GNL2Q13823 731 aaKnown RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 HSP90AA2PQ14568 343 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 NCAPHQ15003 741 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 DNTTIP2Q5QJE6 756 aaKnown RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 PPP2R2DQ66LE6 453 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 OTUD7BQ6GQQ9 843 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 SHC4Q6S5L8 630 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 KRBA2Q6ZNG9 492 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 NEDD1Q8NHV4 660 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 SPATA20Q8TB22 786 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 FAM84BQ96KN1 310 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 NLRP3Q96P20 1036 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 SPOCK3Q9BQ16 436 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 SLC26A6Q9BXS9 759 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 ARPP21Q9UBL0 812 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 PYCARDQ9ULZ3 195 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 SRPRBQ9Y5M8 271 aaKnown RBP8.51□□□□□ -1.05
COL17A1-204ENST00000433822 TACC3Q9Y6A5 838 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 MROH7-TTC4A0A0A0MT08 1334 aa8.51□□□□□ -1.05
COL17A1-204ENST00000433822 MYH2Q9UKX2 1941 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 CCP110O43303 1012 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 BCRP11274 1271 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 SARSP49591 514 aaKnown RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 DPCR1Q3MIW9 517 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 TPTE2Q6XPS3 522 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 CATIPQ7Z7H3 387 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 FCHSD1Q86WN1 690 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 DRC7Q8IY82 874 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 DIS3L2Q8IYB7 885 aaKnown RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 AOPEPQ8N6M6 819 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 MLKLQ8NB16 471 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 CCDC112Q8NEF3 446 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 CACTINQ8WUQ7 758 aaKnown RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 PHKBQ93100 1093 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 FERMT2Q96AC1 680 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 NSUN4Q96CB9 384 aaKnown RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 ACSBG1Q96GR2 724 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 AIFM3Q96NN9 605 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 ZSCAN10Q96SZ4 725 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 PHF20Q9BVI0 1012 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 CRNKL1Q9BZJ0 848 aaKnown RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 AATFQ9NY61 560 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 RAI14Q9P0K7 980 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 FBXO2Q9UK22 296 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-204ENST00000433822 LEMD3Q9Y2U8 911 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 TNKSO95271 1327 aa8.5□□□□□ -1.05
COL17A1-204ENST00000433822 COL4A1P02462 1669 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 PRKAB2O43741 272 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 RHOQP17081 205 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 HIBADHP31937 336 aaKnown RBP8.49□□□□□ -1.05
COL17A1-204ENST00000433822 TOB1P50616 345 aaPredicted RBP8.49□□□□□ -1.05
COL17A1-204ENST00000433822 AKAP17AQ02040 695 aaKnown RBP8.49□□□□□ -1.05
COL17A1-204ENST00000433822 MYL5Q02045 173 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 TROAPQ12815 778 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 XP32Q5T750 250 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 ENAHQ8N8S7 591 aaPredicted RBP8.49□□□□□ -1.05
COL17A1-204ENST00000433822 WDR66Q8TBY9 1149 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
COL17A1-204ENST00000433822 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 BRMS1Q9HCU9 246 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 SH3GLB2Q9NR46 395 aa8.49□□□□□ -1.05
COL17A1-204ENST00000433822 TCP11L1Q9NUJ3 509 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms