RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PXYLP1Q8TE99 480 aa18■□□□□ 0.47
TREX1-201ENST00000433541 PIGSQ96S52 555 aa18■□□□□ 0.47
TREX1-201ENST00000433541 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
TREX1-201ENST00000433541 PFASO15067 1338 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 ABCB11O95342 1321 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 MCM3APO60318 1980 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 TRAF1Q13077 416 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 CCL14Q16627 93 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 MFSD14CQ5VZR4 134 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
TREX1-201ENST00000433541 NPLOC4Q8TAT6 608 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 TRIB2Q92519 343 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 LARP6Q9BRS8 491 aaKnown RBP17.99■□□□□ 0.47
TREX1-201ENST00000433541 TMEM106CQ9BVX2 250 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 AMNQ9BXJ7 453 aa17.99■□□□□ 0.47
TREX1-201ENST00000433541 HTTP42858 3142 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 CCDC196A0A1B0GTZ2 297 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 POTEB2H3BUK9 544 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 COBLO75128 1261 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 NEK4P51957 841 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 STK3Q13188 491 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 USP6NLQ92738 828 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 SPZ1Q9BXG8 430 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 RIOX1Q9H6W3 641 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
TREX1-201ENST00000433541 MRPL11Q9Y3B7 192 aaKnown RBP17.98■□□□□ 0.47
TREX1-201ENST00000433541 PCDHA1Q9Y5I3 950 aa17.98■□□□□ 0.47
TREX1-201ENST00000433541 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
TREX1-201ENST00000433541 NFIBO00712 420 aa17.97■□□□□ 0.47
TREX1-201ENST00000433541 CALML3P27482 149 aa17.97■□□□□ 0.47
TREX1-201ENST00000433541 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
TREX1-201ENST00000433541 ANKRD1Q15327 319 aa17.97■□□□□ 0.47
TREX1-201ENST00000433541 SRBD1Q8N5C6 995 aaKnown RBP17.97■□□□□ 0.47
TREX1-201ENST00000433541 ARMC5Q96C12 935 aa17.97■□□□□ 0.47
TREX1-201ENST00000433541 ZNF333Q96JL9 665 aa17.97■□□□□ 0.47
TREX1-201ENST00000433541 CENPFP49454 3210 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 hCG_1642624A0A1W2PR95 340 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 CYTH3O43739 400 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 HOXC6P09630 235 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 PRKAR2AP13861 404 aaKnown RBP17.96■□□□□ 0.47
TREX1-201ENST00000433541 CNGA1P29973 690 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 RCAN1P53805 252 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 CCT2P78371 535 aaKnown RBP17.96■□□□□ 0.47
TREX1-201ENST00000433541 RNF207Q6ZRF8 634 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 MAML3Q96JK9 1138 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 RNF208Q9H0X6 261 aa17.96■□□□□ 0.47
TREX1-201ENST00000433541 CPLX1O14810 134 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 CCL5P13501 91 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 CYP2C19P33261 490 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 AKAP17AQ02040 695 aaKnown RBP17.95■□□□□ 0.46
TREX1-201ENST00000433541 TRIM32Q13049 653 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 BAATQ14032 418 aaPredicted RBP17.95■□□□□ 0.46
TREX1-201ENST00000433541 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 MTFR1Q15390 333 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 MCF2L2Q86YR7 1114 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 FBXL16Q8N461 479 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 AGXT2Q9BYV1 514 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 HMX1Q9NP08 348 aaPredicted RBP17.95■□□□□ 0.46
TREX1-201ENST00000433541 CYP39A1Q9NYL5 469 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 FLRT1Q9NZU1 646 aa17.95■□□□□ 0.46
TREX1-201ENST00000433541 CFBP00751 764 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 CDC27P30260 824 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 ADD1P35611 737 aaKnown RBP17.94■□□□□ 0.46
TREX1-201ENST00000433541 AK2P54819 239 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 SOX10P56693 466 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 CNTN2Q02246 1040 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 SLC35G1Q2M3R5 365 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 ZNF792Q3KQV3 632 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 SLC30A10Q6XR72 485 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 HEATR3Q7Z4Q2 680 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 MTMR8Q96EF0 704 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 UNC93B1Q9H1C4 597 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 NCOA5Q9HCD5 579 aaKnown RBP17.94■□□□□ 0.46
TREX1-201ENST00000433541 DIS3Q9Y2L1 958 aaKnown RBP17.94■□□□□ 0.46
TREX1-201ENST00000433541 LCTP09848 1927 aa17.94■□□□□ 0.46
TREX1-201ENST00000433541 KIAA0100Q14667 2235 aaKnown RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 PPP1R11O60927 126 aaPredicted RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 PDIA3P30101 505 aaKnown RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 CACNB2Q08289 660 aaPredicted RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 CLEC4DQ8WXI8 215 aa17.93■□□□□ 0.46
TREX1-201ENST00000433541 MPHOSPH6Q99547 160 aaKnown RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 ADD3Q9UEY8 706 aaKnown RBP17.93■□□□□ 0.46
TREX1-201ENST00000433541 CNPY2Q9Y2B0 182 aa17.93■□□□□ 0.46
TREX1-201ENST00000433541 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
TREX1-201ENST00000433541 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
TREX1-201ENST00000433541 RPS6P62753 249 aaKnown RBP17.92■□□□□ 0.46
TREX1-201ENST00000433541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.92■□□□□ 0.46
TREX1-201ENST00000433541 ZNF274Q96GC6 653 aaPredicted RBP17.92■□□□□ 0.46
TREX1-201ENST00000433541 TINF2Q9BSI4 451 aa17.92■□□□□ 0.46
TREX1-201ENST00000433541 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.92■□□□□ 0.46
TREX1-201ENST00000433541 V9GY48 417 aaPredicted RBP17.92■□□□□ 0.46
TREX1-201ENST00000433541 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
TREX1-201ENST00000433541 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
TREX1-201ENST00000433541 RBM25P49756 843 aaKnown RBP17.91■□□□□ 0.46
TREX1-201ENST00000433541 TRIM22Q8IYM9 498 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms