RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ENOX2Q16206 610 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 SPATS2Q86XZ4 545 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 CCDC170Q8IYT3 715 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 PROCA1Q8NCQ7 364 aaPredicted RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 ZNF507Q8TCN5 953 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 NACAP1Q9BZK3 213 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 EPB41P11171 864 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 TCP1P17987 556 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 ITGA6P23229 1130 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 MAGEA1P43355 309 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 RASSF7Q02833 373 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 KLHL7Q8IXQ5 586 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 OR2W6PQ8NHA6 318 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 MIEF2Q96C03 454 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 TBC1D31Q96DN5 1066 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 KRT12Q99456 494 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 TSGA10Q9BZW7 698 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 TNKSO95271 1327 aa12.83□□□□□ -0.36
HMGCS1-202ENST00000433297 A0A1W2PQC6 194 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 EEF1GP26641 437 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 EIF4A3P38919 411 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 SMTNP53814 917 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 NAA25Q14CX7 972 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 IL17AQ16552 155 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 ADSSL1Q8N142 457 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 MCM8Q9UJA3 840 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 NKRFO15226 690 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 TMOD1P28289 359 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 MAP3K12Q12852 859 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 PKN1Q16512 942 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 KDM7AQ6ZMT4 941 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 TOM1L2Q6ZVM7 507 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 LCORLQ8N3X6 602 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 GREM2Q9H772 168 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 SKAP2O75563 359 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 BMP15O95972 392 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 SRGNP10124 158 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 EZRP15311 586 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 GBP2P32456 591 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 KIF11P52732 1056 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 MEA1Q16626 185 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 PTPROQ16827 1216 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 PARP9Q8IXQ6 854 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 SDR42E1Q8WUS8 393 aa12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 CNOT6LQ96LI5 555 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 RNF26Q9BY78 433 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 DDX20Q9UHI6 824 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 PACSIN2Q9UNF0 486 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-202ENST00000433297 RASSF10A6NK89 507 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 RRAGAQ7L523 313 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 NUP58Q9BVL2 599 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 SH2D4AQ9H788 454 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 IQSEC3Q9UPP2 1182 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 PLAAQ9Y263 795 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 PDS5AQ29RF7 1337 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 PAK2Q13177 524 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 CFAP221Q4G0U5 840 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 PREPLQ4J6C6 727 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 TDRD12Q587J7 1177 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 CYB5D1Q6P9G0 228 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 CYFIP2Q96F07 1278 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 ATP6V1G3Q96LB4 118 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 FTCDO95954 541 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 FAM107AO95990 144 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 GFPT1Q06210 699 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 IQCKQ8N0W5 287 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 ARHGAP20Q9P2F6 1191 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 SALL4Q9UJQ4 1053 aa12.81□□□□□ -0.36
HMGCS1-202ENST00000433297 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 OPLAHO14841 1288 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 UBA7P41226 1012 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 SPRED3Q2MJR0 410 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 IFIT1BQ5T764 474 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 CATIPQ7Z7H3 387 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 RASGRP4Q8TDF6 673 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 CAVIN3Q969G5 261 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 MTMR7Q9Y216 660 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 BAZ2BQ9UIF8 2168 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 ADAMTS3O15072 1205 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 RASSF9O75901 435 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 A1CFQ9NQ94 594 aaKnown RBP12.8□□□□□ -0.36
HMGCS1-202ENST00000433297 TCRBV5S4A2TA0A5A2 114 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 DNM1LO00429 736 aa12.79□□□□□ -0.36
HMGCS1-202ENST00000433297 VEGFAP15692 232 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms