RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 FAM170AA1A519 330 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 CTAGE9A4FU28 777 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 CCDC151A5D8V7 595 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 LRRC10BA6NIK2 292 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 GTPBP6O43824 516 aaPredicted RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 STAT6P42226 847 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TFAP4Q01664 338 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 CASP8Q14790 479 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TTI2Q6NXR4 508 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 ANKRD18AQ8IVF6 992 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TMTC2Q8N394 836 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TTYH3Q9C0H2 523 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 RABEP2Q9H5N1 569 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 KANSL2Q9H9L4 492 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 DISC1Q9NRI5 854 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 MCM9Q9NXL9 1143 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 SALL4Q9UJQ4 1053 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 RGPD3A6NKT7 1758 aaPredicted RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 RGPD4Q7Z3J3 1758 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 DDX60LQ5H9U9 1706 aaKnown RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 ITIH6Q6UXX5 1313 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 IRS2Q9Y4H2 1338 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 C19orf67A6NJJ6 358 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TSPY2A6NKD2 308 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 PLCG1P19174 1290 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 PPARDQ03181 441 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 C2orf54Q08AI8 447 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 TXNRD1Q16881 649 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 SKIDA1Q1XH10 827 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 MIIPQ5JXC2 388 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 ANKRD40Q6AI12 368 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 KANK3Q6NY19 840 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 IQCA1Q86XH1 822 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 DNAAF5Q86Y56 855 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 BLIDQ8IZY5 108 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 MB21D1Q8N884 522 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 IQUBQ8NA54 791 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 DRC1Q96MC2 740 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 NAPGQ99747 312 aaPredicted RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 MMTAG2Q9BU76 263 aaKnown RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 FGFBP2Q9BYJ0 223 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 MLXIPQ9HAP2 919 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 EPN1Q9Y6I3 576 aaPredicted RBP8.07□□□□□ -1.12
COL28A1-202ENST00000430711 CAPN6Q9Y6Q1 641 aa8.07□□□□□ -1.12
COL28A1-202ENST00000430711 COL14A1Q05707 1796 aaKnown RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 MACROD2A1Z1Q3 448 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 GOLGA6L9A6NEM1 432 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 SYF2O95926 243 aaKnown RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 TUBB4AP04350 444 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 USP5P45974 858 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 RCAN1P53805 252 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 NFIXQ14938 502 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 ZSCAN26Q16670 478 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 TRAPPC11Q7Z392 1133 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 HEATR3Q7Z4Q2 680 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 CNGA4Q8IV77 575 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 KIAA0895Q8NCT3 520 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 CTCFLQ8NI51 663 aaPredicted RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 GNL3LQ9NVN8 582 aaKnown RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 MYO6Q9UM54 1294 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 SNED1Q8TER0 1413 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 LGALS16A8MUM7 142 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 STXBP3O00186 592 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 NCK2O43639 380 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 DDAH1O94760 285 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 PRKAR2AP13861 404 aaKnown RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 CXCR5P32302 372 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 KCNK18Q7Z418 384 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 MAPKAPK5Q8IW41 473 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 ANKRD13CQ8N6S4 541 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 COG1Q8WTW3 980 aa8.06□□□□□ -1.12
COL28A1-202ENST00000430711 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 FEZ2Q9UHY8 353 aaPredicted RBP8.06□□□□□ -1.12
COL28A1-202ENST00000430711 PDS5AQ29RF7 1337 aaKnown RBP8.05□□□□□ -1.12
COL28A1-202ENST00000430711 ORC4O43929 436 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 ZPR1O75312 459 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 CCDC178Q5BJE1 867 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 JAKMIP3Q5VZ66 844 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 CYP26C1Q6V0L0 522 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 TRIM47Q96LD4 638 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 DNAJC7Q99615 494 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 SEMA6BQ9H3T3 888 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 RBM28Q9NW13 759 aaKnown RBP8.05□□□□□ -1.12
COL28A1-202ENST00000430711 PCNTO95613 3336 aa8.05□□□□□ -1.12
COL28A1-202ENST00000430711 AGPSO00116 658 aa8.04□□□□□ -1.12
COL28A1-202ENST00000430711 TM4SF1P30408 202 aa8.04□□□□□ -1.12
COL28A1-202ENST00000430711 UBE4AQ14139 1066 aa8.04□□□□□ -1.12
COL28A1-202ENST00000430711 BRD3Q15059 726 aa8.04□□□□□ -1.12
COL28A1-202ENST00000430711 LRRC41Q15345 812 aa8.04□□□□□ -1.12
COL28A1-202ENST00000430711 DDB1Q16531 1140 aa8.04□□□□□ -1.12
COL28A1-202ENST00000430711 ECM1Q16610 540 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms