RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 ZNF536O15090 1300 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 ELP1O95163 1332 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 FRMPD2Q68DX3 1309 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-211ENST00000430454 DNAH12Q6ZR08 3092 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 A0A1W2PQ45 241 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-211ENST00000430454 A0A1W2PQY0 241 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 ERICH2A1L162 156 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 DHX16O60231 1041 aaKnown RBP10.68□□□□□ -0.7
HDAC9-211ENST00000430454 KDM4AO75164 1064 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 CABYRO75952 493 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 PDHBP11177 359 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 TAL1P17542 331 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-211ENST00000430454 SLC16A2P36021 539 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 ACLYP53396 1101 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 SNX17Q15036 470 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 LRIT3Q3SXY7 679 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 BRDTQ58F21 947 aaPredicted RBP10.68□□□□□ -0.7
HDAC9-211ENST00000430454 GNASQ5JWF2 1037 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 IQSEC1Q6DN90 963 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 VTA1Q9NP79 307 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 STARD7Q9NQZ5 370 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 CYP39A1Q9NYL5 469 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 TRIOBPQ9H2D6 2365 aa10.68□□□□□ -0.7
HDAC9-211ENST00000430454 SYNRGQ9UMZ2 1314 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 PTPDC1A2A3K4 754 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 TLR3O15455 904 aaKnown RBP10.67□□□□□ -0.7
HDAC9-211ENST00000430454 ADAMTS4O75173 837 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 CLTBP09497 229 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 PARP1P09874 1014 aaKnown RBP10.67□□□□□ -0.7
HDAC9-211ENST00000430454 SNHG28P0DPA3 235 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 CST5P28325 142 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-211ENST00000430454 GJA9P57773 515 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-211ENST00000430454 TLE2Q04725 743 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 TRIM60Q495X7 471 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 IFIT1BQ5T764 474 aaKnown RBP10.67□□□□□ -0.7
HDAC9-211ENST00000430454 RNF207Q6ZRF8 634 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 RALYLQ86SE5 291 aaKnown RBP10.67□□□□□ -0.7
HDAC9-211ENST00000430454 MCF2L2Q86YR7 1114 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 RGS22Q8NE09 1264 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 TOX2Q96NM4 488 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 Q9Y3F1 56 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 PLXNA1Q9UIW2 1896 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 FRMPD3Q5JV73 1810 aa10.67□□□□□ -0.7
HDAC9-211ENST00000430454 NEDD4P46934 1319 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 B4E1Z4 1266 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 PQBP1O60828 265 aaKnown RBP10.66□□□□□ -0.7
HDAC9-211ENST00000430454 RAG1P15918 1043 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 SNAP25P60880 206 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 CNTN2Q02246 1040 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 PDE4DQ08499 809 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-211ENST00000430454 KCNA10Q16322 511 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 TTBK2Q6IQ55 1244 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 KLHDC9Q8NEP7 349 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 DNERQ8NFT8 737 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 ZKSCAN3Q9BRR0 538 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 UPF3AQ9H1J1 476 aaKnown RBP10.66□□□□□ -0.7
HDAC9-211ENST00000430454 TMEM39AQ9NV64 488 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
HDAC9-211ENST00000430454 RANBP2P49792 3224 aaKnown RBP10.65□□□□□ -0.7
HDAC9-211ENST00000430454 TNKSO95271 1327 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 ABCB11O95342 1321 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 A0A0U1RQG5 324 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-211ENST00000430454 SOWAHBA6NEL2 793 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 CHMLP26374 656 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 CALML3P27482 149 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 NKX3-2P78367 333 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 IRX6P78412 446 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-211ENST00000430454 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 CASC1Q6TDU7 716 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 ANKRD33Q7Z3H0 272 aa10.65□□□□□ -0.7
HDAC9-211ENST00000430454 ENAHQ8N8S7 591 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-211ENST00000430454 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
HDAC9-211ENST00000430454 KIAA0355O15063 1070 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 KPNA6O60684 536 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 ASGR1P07306 291 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 GOLGA8HP0CJ92 632 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 GSPT1P15170 499 aaKnown RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 PDE4AP27815 886 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 CPT1AP50416 773 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 ALDH5A1P51649 535 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 CDC37Q16543 378 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 FSCN1Q16658 493 aaKnown RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 TLK2Q86UE8 772 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 NCOA7Q8NI08 942 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 MORC4Q8TE76 937 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 FGD4Q96M96 766 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 POLR3EQ9NVU0 708 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 MAP3K20Q9NYL2 800 aaKnown RBP10.64□□□□□ -0.71
HDAC9-211ENST00000430454 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
HDAC9-211ENST00000430454 ARVCFO00192 962 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms