RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 SPTLC3Q9NUV7 552 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 A0A1W2PRG0 241 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 NEMFO60524 1076 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 TPM3P06753 285 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 PLCG1P19174 1290 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 CCT6AP40227 531 aaKnown RBP11.45□□□□□ -0.58
RPE-206ENST00000429921 NOVP48745 357 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 ICA1Q05084 483 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 KIAA1755Q5JYT7 1200 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 NT5DC1Q5TFE4 455 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
RPE-206ENST00000429921 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 BMP15O95972 392 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 OR52Z1P0C646 297 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 GNA11P29992 359 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 QRICH1Q2TAL8 776 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 ASPRV1Q53RT3 343 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 KANK3Q6NY19 840 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 CABP7Q86V35 215 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 MLKLQ8NB16 471 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 DAGLBQ8NCG7 672 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 ACER1Q8TDN7 264 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 DISC1Q9NRI5 854 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 F5H6K3 240 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 RPN1P04843 607 aaKnown RBP11.44□□□□□ -0.58
RPE-206ENST00000429921 SNHG28P0DPA3 235 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 ERCC3P19447 782 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
RPE-206ENST00000429921 KLRC3Q07444 240 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 DGKZQ13574 1117 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 KRT25Q7Z3Z0 450 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
RPE-206ENST00000429921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
RPE-206ENST00000429921 SIPA1L1O43166 1804 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 SYNRGQ9UMZ2 1314 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 PNMA6FA0A0J9YX94 578 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 EGFRP00533 1210 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 PMS1P54277 932 aaKnown RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 NBPF9Q3BBW0 867 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 SERPINA10Q9UK55 444 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 SSUH2Q9Y2M2 353 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 TNNT1P13805 278 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 HOXA13P31271 388 aaPredicted RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 TXLNAP40222 546 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 PRCPP42785 496 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 CDC37Q16543 378 aaPredicted RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 RSBN1LQ6PCB5 846 aaPredicted RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 DYMQ7RTS9 669 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 CCDC12Q8WUD4 166 aaPredicted RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 IDI2Q9BXS1 227 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
RPE-206ENST00000429921 VPS16Q9H269 839 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 PSTPIP2Q9H939 334 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 POLD4Q9HCU8 107 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 FZD1Q9UP38 647 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 PCDHA1Q9Y5I3 950 aa11.43□□□□□ -0.58
RPE-206ENST00000429921 ZBTB5O15062 677 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 MARCH6O60337 910 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 NDUFB10O96000 172 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 SFPQP23246 707 aaKnown RBP eCLIP11.42□□□□□ -0.58
RPE-206ENST00000429921 BAG6P46379 1132 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 CALCRLQ16602 461 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 KMT5BQ4FZB7 885 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 CEP135Q66GS9 1140 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 ARL6IP4Q66PJ3 421 aaKnown RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 ZNF70Q9UC06 446 aaPredicted RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 QSER1Q2KHR3 1735 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 ASTN2O75129 1339 aaPredicted RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 RIOK3O14730 519 aaKnown RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 FCER1AP12319 257 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 STAT3P40763 770 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 UBXN2AP68543 259 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 RAD51AP2Q09MP3 1159 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 NAA30Q147X3 362 aaPredicted RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 GPIHBP1Q8IV16 184 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 VSTM4Q8IW00 320 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 ENOX1Q8TC92 643 aaKnown RBP11.42□□□□□ -0.58
RPE-206ENST00000429921 NELFBQ8WX92 580 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 TBC1D5Q92609 795 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 KANSL2Q9H9L4 492 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 TAB2Q9NYJ8 693 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 PLIN4Q96Q06 1357 aa11.42□□□□□ -0.58
RPE-206ENST00000429921 PES1O00541 588 aaKnown RBP11.41□□□□□ -0.58
RPE-206ENST00000429921 NKRFO15226 690 aaKnown RBP eCLIP11.41□□□□□ -0.58
RPE-206ENST00000429921 IGSF3O75054 1194 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 ZNF18P17022 549 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 MCM6Q14566 821 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 ECM1Q16610 540 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
RPE-206ENST00000429921 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms